RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 SPIN4Q56A73 249 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 UBE3DQ7Z6J8 389 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 PARP9Q8IXQ6 854 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 TMEM132CQ8N3T6 1108 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 SLC5A8Q8N695 610 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 AGAP11Q8TF27 550 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 DAZLQ92904 295 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 METTL2AQ96IZ6 378 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 ZNF552Q9H707 407 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 MID1IP1Q9NPA3 183 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 ADAP2Q9NPF8 381 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 PFDN4Q9NQP4 134 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 VPS29Q9UBQ0 182 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 SLC12A4Q9UP95 1085 aa13.15□□□□□ -0.3
SNRPA1-216ENST00000626000 KALRNO60229 2985 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 BAHCC1Q9P281 2608 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 A0A0A6YYD5 115 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 DYTNA2CJ06 578 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 SAGE2PA6NJ88 616 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 MANBAO00462 879 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 NPHS1O60500 1241 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 SEC24DO94855 1032 aaPredicted RBP13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ZWINTO95229 277 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 B3GALT4O96024 378 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 NR2F6P10588 404 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 BSGP35613 385 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 NEK2P51955 445 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 MFAP5Q13361 173 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 PCLAFQ15004 111 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ELAVL1Q15717 326 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ABHD17BQ5VST6 288 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 IGFL2Q6UWQ7 119 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ZNF793Q6ZN11 406 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 METTL4Q8N3J2 472 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 EFCAB3Q8N7B9 438 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 FAM47BQ8NA70 645 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 PNPLA2Q96AD5 504 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ZNF354BQ96LW1 612 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 CENPHQ9H3R5 247 aa13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 RPF2Q9H7B2 306 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 RALYQ9UKM9 306 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-216ENST00000626000 SAP18O00422 153 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 RTCAO00442 366 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 SUV39H1O43463 412 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 TYROBPO43914 113 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 C1QL1O75973 258 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 PDYNP01213 254 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 FAM58BPP0C7Q3 252 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 UROSP10746 265 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 TSPAN8P19075 237 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 MAOAP21397 527 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 CASRP41180 1078 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 MAPK12P53778 367 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 SLC26A5P58743 744 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 TRA2BP62995 288 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 PLIN5Q00G26 463 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 SGO1Q5FBB7 561 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 BEND6Q5SZJ8 279 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 OR52E8Q6IFG1 317 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 RNF165Q6ZSG1 346 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 OR14A16Q8NHC5 309 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 TSLPQ969D9 159 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 ART5Q96L15 291 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 MAPKAP1Q9BPZ7 522 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 WDR77Q9BQA1 342 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 RRAGDQ9NQL2 400 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 VTI1BQ9UEU0 232 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 PSME2Q9UL46 239 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 PPIEQ9UNP9 301 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 B3GNT3Q9Y2A9 372 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 WBP11Q9Y2W2 641 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 CLCA3PQ9Y6N3 262 aa13.13□□□□□ -0.31
SNRPA1-216ENST00000626000 PCSK5Q92824 1860 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 SCN2AQ99250 2005 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 FOXO6A8MYZ6 492 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 FAM227AF5H4B4 570 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 BIRC5O15392 142 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 PROM1O43490 865 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 NEFHP12036 1026 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 GALNSP34059 522 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 BTG2P78543 158 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 ACSM2AQ08AH3 577 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 TLR1Q15399 786 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 MEP1AQ16819 746 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 IMPG1Q17R60 797 aa13.12□□□□□ -0.31
SNRPA1-216ENST00000626000 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms