RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 RAE1P78406 368 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 RHDQ02161 417 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 DCAF10Q5QP82 559 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 Q6ZSR9 355 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 ANKRD37Q7Z713 158 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 C1orf52Q8N6N3 182 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 APOBEC4Q8WW27 367 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 SREK1Q8WXA9 508 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 UCN3Q969E3 161 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 PAIP2Q9BPZ3 127 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
CBWD3-217ENST00000621474 ADAM29Q9UKF5 820 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 TRAF6Q9Y4K3 522 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 CROCCQ5TZA2 2017 aa13.45□□□□□ -0.26
CBWD3-217ENST00000621474 IGHV3-20A0A0C4DH32 117 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 A0A1W2PR48 441 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 TCRBV16S1A1N1A0A5B0 115 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 WASHC1A8K0Z3 465 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 HMGB1P1B2RPK0 211 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-217ENST00000621474 TMEM114B3SHH9 223 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 ERVH48-1M5A8F1 160 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 PSMD12O00232 456 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-217ENST00000621474 PROM1O43490 865 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 PRMT3O60678 531 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 JUNP05412 331 aaKnown RBP13.44□□□□□ -0.26
CBWD3-217ENST00000621474 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 ACPPP15309 386 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 POLE2P56282 527 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 TNFRSF17Q02223 184 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 EEF1A2Q05639 463 aaKnown RBP13.44□□□□□ -0.26
CBWD3-217ENST00000621474 Q0VFX4 171 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 BST1Q10588 318 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 NSDHLQ15738 373 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 HHATQ5VTY9 493 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 GPR180Q86V85 440 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 ZNF595Q8IYB9 648 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 CLYBLQ8N0X4 340 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 ZNF781Q8N8C0 355 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 ADAMTS18Q8TE60 1221 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 PTCHD1Q96NR3 888 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 PRDM9Q9NQV7 894 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 TEX10Q9NXF1 929 aaPredicted RBP13.44□□□□□ -0.26
CBWD3-217ENST00000621474 HAO1Q9UJM8 370 aa13.44□□□□□ -0.26
CBWD3-217ENST00000621474 TLN1Q9Y490 2541 aaKnown RBP13.43□□□□□ -0.26
CBWD3-217ENST00000621474 NPIPB8E9PQR5 432 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 PCDH17O14917 1159 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 LDB3O75112 727 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 CRCPO75575 148 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 FAM87AP0C7U9 286 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 CPN2P22792 545 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 PRPH2P23942 346 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 GRK2P25098 689 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 SLC1A6P48664 564 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 HSD17B7P56937 341 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 KIAA0040Q15053 153 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 GALNT18Q6P9A2 607 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 EFCAB3Q8N7B9 438 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 EXD3Q8N9H8 876 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 PPP1R14CQ8TAE6 165 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 TWIST2Q8WVJ9 160 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 IMMP1LQ96LU5 166 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 BBC3Q96PG8 261 aaPredicted RBP13.43□□□□□ -0.26
CBWD3-217ENST00000621474 ZNF700Q9H0M5 742 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 SIRT5Q9NXA8 310 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 NKIRAS1Q9NYS0 192 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 MMACHCQ9Y4U1 282 aa13.43□□□□□ -0.26
CBWD3-217ENST00000621474 PEX12O00623 359 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 SNNO75324 88 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CEACAM4O75871 244 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 RSL1D1O76021 490 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 AIFM1O95831 613 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 PPP2R1BP30154 601 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 SPIN4Q56A73 249 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 XKR7Q5GH72 579 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CCNYL2Q5T2Q4 361 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CYP20A1Q6UW02 462 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 RIPOR1Q6ZS17 1223 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 NDUFAF7Q7L592 441 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CPEB2Q7Z5Q1 589 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CLNKQ7Z7G1 428 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 GOLGA6L1Q8N7Z2 621 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 ANKRD9Q96BM1 317 aaPredicted RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 C3orf30Q96M34 536 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 FER1L6-AS2Q96M78 137 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 ZNF160Q9HCG1 818 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 PRTFDC1Q9NRG1 225 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 NMRK1Q9NWW6 199 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 LYARQ9NX58 379 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 MS4A12Q9NXJ0 267 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 AHSPQ9NZD4 102 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CPAMD8Q8IZJ3 1885 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CNTRLQ7Z7A1 2325 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 GLOD5A6NK44 160 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 LSM1O15116 133 aaKnown RBP13.42□□□□□ -0.26
CBWD3-217ENST00000621474 FGF17O60258 216 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 CTNSO60931 367 aa13.42□□□□□ -0.26
CBWD3-217ENST00000621474 HSPA4LO95757 839 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms