RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 PSD4Q8NDX1 1056 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 SEC14L4Q9UDX3 406 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 CLEC2DQ9UHP7 191 aa12.48□□□□□ -0.41
SKP2-209ENST00000620197 TBX19O60806 448 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 GADD45GO95257 159 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 GAAP10253 952 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 FRKP42685 505 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 CRATP43155 626 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 SNRPD1P62314 119 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 CYP4F2P78329 520 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 DMPKQ09013 629 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 DUSP7Q16829 419 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 Q5BKY6 102 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 UTS2BQ765I0 119 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 HSD11B1LQ7Z5J1 315 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 CLDN22Q8N7P3 220 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 OR4K1Q8NGD4 311 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 CREB3L4Q8TEY5 395 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 DMRT3Q9NQL9 472 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 CLN6Q9NWW5 311 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 TBC1D14Q9P2M4 693 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 SF3B6Q9Y3B4 125 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 TRBV4-1A0A0J9YWV2 114 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 TNFRSF10AO00220 468 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 CPEP16870 476 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 ZNF30P17039 623 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 PRKCAP17252 672 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 SOX3P41225 446 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 PRLHRP49683 370 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 ALDH6A1Q02252 535 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 LARS2Q15031 903 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 MFSD4BQ5TF39 518 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 SAXO2Q658L1 398 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 PHC2Q8IXK0 858 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 ZNF485Q8NCK3 441 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 PROKR2Q8NFJ6 384 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 C16orf78Q8WTQ4 265 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 KIAA1143Q96AT1 154 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 KRT75O95678 551 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 SLC16A8O95907 504 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 TBX6O95947 436 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 NPPBP16860 134 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 ELAVL4P26378 380 aaKnown RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 MED22Q15528 200 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 FAM209AQ5JX71 171 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 ZNF517Q6ZMY9 492 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 IKBIPQ70UQ0 350 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 KRT73Q86Y46 540 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 FOXJ1Q92949 421 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 IGSF21Q96ID5 467 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 TRAF4Q9BUZ4 470 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 TMEM121BQ9BXQ6 578 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 ZNF717Q9BY31 904 aaPredicted RBP12.47□□□□□ -0.41
SKP2-209ENST00000620197 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
SKP2-209ENST00000620197 A0A1W2PQ45 241 aaPredicted RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 A0A1W2PQ67 120 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 A0A1W2PQY0 241 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 MEIOCA2RUB1 952 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 PDZK1P1A8MUH7 402 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 H3BM21 787 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 HOXA2O43364 376 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 LILRB5O75023 590 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 IL1AP01583 271 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 APOA1P02647 267 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 PRIM2P49643 509 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 RORCP51449 518 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 MPPE1Q53F39 396 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 ASTLQ6HA08 431 aaPredicted RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 FAM92BQ6ZTR7 304 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 MRGPREQ86SM8 312 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 TCEAL8Q8IYN2 117 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 TRAM1L1Q8N609 369 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 ASCC1Q8N9N2 400 aaKnown RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 OR7G1Q8NGA0 311 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 WDR36Q8NI36 951 aaKnown RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 UTP15Q8TED0 518 aaKnown RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 ELMO1Q92556 727 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 GTPBP3Q969Y2 492 aaKnown RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 ZC3HAV1LQ96H79 300 aaKnown RBP12.46□□□□□ -0.41
SKP2-209ENST00000620197 TMEM80Q96HE8 168 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 MND1Q9BWT6 205 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 IMPAD1Q9NX62 359 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 TAAR2Q9P1P5 351 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 ACSL6Q9UKU0 697 aa12.46□□□□□ -0.41
SKP2-209ENST00000620197 MFN2O95140 757 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 HLA-FP30511 346 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 MAPK9P45984 424 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 MC1RQ01726 317 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 RAB33AQ14088 237 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 SPHARQ15513 63 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.46□□□□□ -0.42
SKP2-209ENST00000620197 ZNF628Q5EBL2 1059 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 SLC35F1Q5T1Q4 408 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.42
SKP2-209ENST00000620197 TRIM40Q6P9F5 258 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms