RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 TRMT61AQ96FX7 289 aaKnown RBP19.47■□□□□ 0.71
NEK3-208ENST00000618534 MUTYHQ9UIF7 546 aa19.47■□□□□ 0.71
NEK3-208ENST00000618534 V9GYH0 126 aa19.47■□□□□ 0.71
NEK3-208ENST00000618534 DSPPQ9NZW4 1301 aa19.47■□□□□ 0.71
NEK3-208ENST00000618534 ARRDC5A6NEK1 342 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 TLR4O00206 839 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 CAPN5O15484 640 aaPredicted RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 CSO75390 466 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 SRPRAP08240 638 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 POLR2EP19388 210 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 DCDC1P59894 354 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 MEF2AQ02078 507 aaPredicted RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 GPR50Q13585 617 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 RPS26P11Q5JNZ5 115 aaPredicted RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 SPOUT1Q5T280 376 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 HENMT1Q5T8I9 393 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 FAM71E1Q6IPT2 247 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.46■□□□□ 0.71
NEK3-208ENST00000618534 WDR53Q7Z5U6 358 aaPredicted RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 TRAM1L1Q8N609 369 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 REPS1Q96D71 796 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 NOX1Q9Y5S8 564 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 A0A1W2PRB8 838 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 ATG13O75143 517 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 AZGP1P25311 298 aaKnown RBP19.46■□□□□ 0.71
NEK3-208ENST00000618534 TGM4P49221 684 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 RHAGQ02094 409 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.46■□□□□ 0.71
NEK3-208ENST00000618534 KRT73Q86Y46 540 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 GATAD2AQ86YP4 633 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 LAX1Q8IWV1 398 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 SLC34A3Q8N130 599 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 OR2A12Q8NGT7 310 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 SPNS1Q9H2V7 528 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 MYNNQ9NPC7 610 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 FZD3Q9NPG1 666 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 KCND3Q9UK17 655 aa19.46■□□□□ 0.71
NEK3-208ENST00000618534 ZNF197O14709 1029 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 GRM6O15303 877 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 KLK1P06870 262 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 CYP2A6P11509 494 aaPredicted RBP19.45■□□□□ 0.7
NEK3-208ENST00000618534 CSTF2P33240 577 aaKnown RBP eCLIP19.45■□□□□ 0.7
NEK3-208ENST00000618534 RFX2P48378 723 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 ALDH9A1P49189 494 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 DSTNP60981 165 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 SLC7A9P82251 487 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 FAM83CQ9BQN1 747 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 OR2B2Q9GZK3 357 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 GPBP1L1Q9HC44 474 aaPredicted RBP19.45■□□□□ 0.7
NEK3-208ENST00000618534 SNTG1Q9NSN8 517 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 REV1Q9UBZ9 1251 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 NINQ8N4C6 2090 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 PIPSLA2A3N6 862 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 LEFTY2O00292 366 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 WWP2O00308 870 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 NPPBP16860 134 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 TM4SF4P48230 202 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 PNLIPRP1P54315 467 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 ZNF79Q15937 498 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 BAK1Q16611 211 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 LHX8Q68G74 356 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 SETD6Q8TBK2 473 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 BTN2A2Q8WVV5 523 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 TIFAQ96CG3 184 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 FOPNLQ96NB1 174 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 CCDC177Q9NQR7 707 aaPredicted RBP19.45■□□□□ 0.7
NEK3-208ENST00000618534 ASAH2Q9NR71 780 aa19.45■□□□□ 0.7
NEK3-208ENST00000618534 DDX28Q9NUL7 540 aaKnown RBP19.45■□□□□ 0.7
NEK3-208ENST00000618534 A8MV72 311 aaPredicted RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 FOXE1O00358 373 aaPredicted RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 MFN2O95140 757 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 KRT75O95678 551 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 IL3P08700 152 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 PRLHRP49683 370 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 RPS26P62854 115 aaKnown RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 SEC23BQ15437 767 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 SPHARQ15513 63 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 BRAT1Q6PJG6 821 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 TMPRSS11AQ6ZMR5 421 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 ZNF517Q6ZMY9 492 aaPredicted RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 ZSCAN5AQ9BUG6 496 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 UCK2Q9BZX2 261 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 RPL3P39023 403 aaKnown RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 CRYBB2P43320 205 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 ARMC4Q5T2S8 1044 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 BCDIN3DQ7Z5W3 292 aaKnown RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 APOBEC4Q8WW27 367 aaKnown RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 KLHL6Q8WZ60 621 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 SORBS1Q9BX66 1292 aaKnown RBP19.44■□□□□ 0.7
NEK3-208ENST00000618534 CXorf36Q9H7Y0 433 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 SPATA7Q9P0W8 599 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 GULP1Q9UBP9 304 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 GRIP1Q9Y3R0 1128 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 DYRK1BQ9Y463 629 aa19.44■□□□□ 0.7
NEK3-208ENST00000618534 LINC00854A0A1B0GVQ3 168 aa19.43■□□□□ 0.7
NEK3-208ENST00000618534 QSOX1O00391 747 aa19.43■□□□□ 0.7
NEK3-208ENST00000618534 UGT2B17O75795 530 aa19.43■□□□□ 0.7
NEK3-208ENST00000618534 SEMA3DO95025 777 aa19.43■□□□□ 0.7
NEK3-208ENST00000618534 C1orf105O95561 183 aa19.43■□□□□ 0.7
NEK3-208ENST00000618534 ADAP00813 363 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms