RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	PCDH8	O95206	1070 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OXSR1	O95747	527 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CD36	P16671	472 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ELP6	Q0PNE2	266 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAHD1	Q6P587	224 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CXorf40A	Q8TE69	158 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF566	Q969W8	418 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OTUB2	Q96DC9	234 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OTUB1	Q96FW1	271 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SH3YL1	Q96HL8	342 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAM129B	Q96TA1	746 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EPYC	Q99645	322 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SGPP1	Q9BX95	441 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ROGDI	Q9GZN7	287 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OSGEPL1	Q9H4B0	414 aa		13.26	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	WASHC1	A8K0Z3	465 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HAT1	O14929	419 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TMCC2	O75069	709 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TNFRSF21	O75509	655 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HSMCR30	P0CW71	290 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HOXB6	P17509	224 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	JUND	P17535	347 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ITGB7	P26010	798 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HAAO	P46952	286 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DUSP7	Q16829	419 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	UAP1L1	Q3KQV9	507 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	WASH2P	Q6VEQ5	465 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HEATR4	Q86WZ0	1026 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	UCN3	Q969E3	161 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	POP5	Q969H6	163 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	C1GALT1	Q9NS00	363 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAIM	Q9NVQ4	179 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SAGE1	Q9NXZ1	904 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	GPR83	Q9NYM4	423 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TAAR2	Q9P1P5	351 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ATP6V1H	Q9UI12	483 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	NAALAD2	Q9Y3Q0	740 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SCN3A	Q9NY46	2000 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CEP290	O15078	2479 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SCN2A	Q99250	2005 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	KIAA0355	O15063	1070 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADAMDEC1	O15204	470 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PROX2	Q3B8N5	592 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAM71E1	Q6IPT2	247 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TRIM40	Q6P9F5	258 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CEACAM20	Q6UY09	585 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	DCDC5	Q6ZRR9	648 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	VN1R5	Q7Z5H4	357 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	AMZ2	Q86W34	360 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CCDC103	Q8IW40	242 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR52N2	Q8NGI0	321 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	EXOSC8	Q96B26	276 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF707	Q96C28	371 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	COX4I2	Q96KJ9	171 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MACROD1	Q9BQ69	325 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CXorf36	Q9H7Y0	433 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MOSPD1	Q9UJG1	213 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PADI2	Q9Y2J8	665 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR1A2	Q9Y585	309 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SNX11	Q9Y5W9	270 aa		13.25	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TMEM238L	A0A1B0GVL6	79 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	IGLON5	A6NGN9	336 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FOXE1	O00358	373 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PI15	O43692	258 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PAPLN	O95428	1278 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	BCHE	P06276	602 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MANF	P55145	182 aa	Known RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	C21orf58	P58505	322 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	STK11	Q15831	433 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF658B	Q4V348	819 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAM78A	Q5JUQ0	283 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	CAMKMT	Q7Z624	323 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LAS2	Q8IYD9	372 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	METTL4	Q8N3J2	472 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OR2L2	Q8NH16	312 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	SUSD6	Q92537	303 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF300	Q96RE9	604 aa	Predicted RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	FAM83C	Q9BQN1	747 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ITM2C	Q9NQX7	267 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TRBC2	A0A5B9	178 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PSMD11	O00231	422 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	PPM1D	O15297	605 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ACADL	P28330	430 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	MAPK12	P53778	367 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ELAVL3	Q14576	367 aa	Known RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	BCL7A	Q4VC05	210 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ZNF600	Q6ZNG1	722 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	OLIG3	Q7RTU3	272 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	ADGRD2	Q7Z7M1	963 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	C17orf64	Q86WR6	236 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TRUB1	Q8WWH5	349 aa	Known RBP	13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	RAD51AP1	Q96B01	352 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	HRASLS5	Q96KN8	279 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	XKR8	Q9H6D3	395 aa		13.24	□□□□□ -0.29
CACNA1C-231	ENST00000616390	TAS2R16	Q9NYV7	291 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms