RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 TMEM200AQ86VY9 491 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 ZDHHC21Q8IVQ6 265 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 C22orf15Q8WYQ4 148 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 LRRC46Q96FV0 321 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 RHOJQ9H4E5 214 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 A0A0A6YYJ9 748 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 SDC3O75056 442 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 PER3P56645 1201 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 KIAA0141Q14154 515 aaPredicted RBP8.96□□□□□ -0.98
COL12A1-211ENST00000615798 GPR180Q86V85 440 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 CYP2W1Q8TAV3 490 aa8.96□□□□□ -0.98
COL12A1-211ENST00000615798 MRM3Q9HC36 420 aaKnown RBP8.96□□□□□ -0.98
COL12A1-211ENST00000615798 IGLV3-22A0A075B6J6 115 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TMEM235A6NFC5 223 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 M0QZK8 103 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 WNT10BO00744 389 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TOX3O15405 576 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GGCTO75223 188 aaKnown RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 STAG3L3P0CL85 134 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CBLP22681 906 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NFYBP25208 207 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 AKT2P31751 481 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 RDH10Q8IZV5 341 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 POLR2J3Q9H1A7 115 aaKnown RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 VPS28Q9UK41 221 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CLCA3PQ9Y6N3 262 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NAP1L6A6NFF2 107 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TRAF3IP2O43734 574 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 PABPC4LP0CB38 370 aaKnown RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 HOXB9P17482 250 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 HSD11B1P28845 292 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GJA5P36382 358 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CASP3P42574 277 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GPX6P59796 221 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SULT2A1Q06520 285 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 Q1RN00 199 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 OR6K6Q8NGW6 343 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TNFRSF10BO14763 440 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SEC14L5O43304 696 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 JCHAINP01591 159 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NAT2P11245 290 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ARL2P36404 184 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 OSTF1Q92882 214 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SH2D3AQ9BRG2 576 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SEMA4BQ9NPR2 832 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ANKMY1Q9P2S6 941 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ARL2-SNX15V9GYD0 113 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 MIA3Q5JRA6 1907 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 LAMP2P13473 410 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CD247P20963 164 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GRM5P41594 1212 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NPBWR1P48145 328 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TAS2R30P59541 319 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 PPA1Q15181 289 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GPR153Q6NV75 609 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 RALGPS2Q86X27 583 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 INTS1Q8N201 2190 aaKnown RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 KCNRGQ8N5I3 272 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 OR6C4Q8NGE1 309 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 KCTD3Q9Y597 815 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 B4GAT1O43505 415 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GCATO75600 419 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ADH1BP00325 375 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ITGB5P18084 799 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 TM4SF1P30408 202 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 OR1G1P47890 313 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GRIK4Q16099 956 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 EDEM2Q9BV94 578 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NOBOXO60393 691 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GPR85P60893 370 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 RAB10P61026 200 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 DHRS11Q6UWP2 260 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NAA40Q86UY6 237 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GRIN3AQ8TCU5 1115 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 LINC01599Q8WXQ3 324 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NIPSNAP3BQ9BS92 247 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 FAM198AQ9UFP1 575 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 HEATR5BQ9P2D3 2071 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 URADA6NGE7 173 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 DIRAS3O95661 229 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 JUNP05412 331 aaKnown RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SMSP52788 366 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 GPR162Q16538 588 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SLC25A52Q3SY17 297 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 KCTD20Q7Z5Y7 419 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SPIN2AQ99865 258 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 SPIN2BQ9BPZ2 258 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 PHOX2AO14813 284 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 RAMP2O60895 175 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 HLA-HP01893 362 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 MT-ND2P03891 347 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 MMP7P09237 267 aaPredicted RBP8.95□□□□□ -0.98
COL12A1-211ENST00000615798 ELFN1P0C7U0 828 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 LSSP48449 732 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CMPK2Q5EBM0 449 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 RFPL4BQ6ZWI9 263 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 NANPQ8TBE9 248 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 FBXL18Q96ME1 805 aa8.95□□□□□ -0.98
COL12A1-211ENST00000615798 CDK5RAP2Q96SN8 1893 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms