RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 ACAD8Q9UKU7 415 aa21.65■■□□□ 1.06
MMP28-203ENST00000612672 JMJD1CQ15652 2540 aa21.65■■□□□ 1.06
MMP28-203ENST00000612672 ZANQ9Y493 2812 aa21.65■■□□□ 1.06
MMP28-203ENST00000612672 LRIT2A6NDA9 550 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 NPEPPSL1A6NEC2 478 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 A6NNC1 897 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 WDR1O75083 606 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 ENO2P09104 434 aaPredicted RBP21.64■■□□□ 1.05
MMP28-203ENST00000612672 RFPL3SP0C7P2 107 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 DNASE1P24855 282 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 PIGAP37287 484 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 MAN2A2P49641 1150 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 LIM2P55344 173 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 WNT3P56703 355 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 BMPR2Q13873 1038 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 RIPPLY2Q5TAB7 128 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 FAM47EQ6ZV65 393 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 GPATCH11Q8N954 259 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 MS4A14Q96JA4 679 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 NPLQ9BXD5 320 aaPredicted RBP21.64■■□□□ 1.05
MMP28-203ENST00000612672 HOMER3Q9NSC5 361 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 ALKBH4Q9NXW9 302 aa21.64■■□□□ 1.05
MMP28-203ENST00000612672 SUSD5O60279 629 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 PRAMEF4O60810 478 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 UQCRC1P31930 480 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 GDF5P43026 501 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 PLA2G16P53816 162 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 RNF4P78317 190 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 SLBPQ14493 270 aaKnown RBP eCLIP21.63■■□□□ 1.05
MMP28-203ENST00000612672 PRAMEF9Q5VWM5 478 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 PAMR1Q6UXH9 720 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 SLCO4C1Q6ZQN7 724 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 KRTAP1-3Q8IUG1 177 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 ZNF595Q8IYB9 648 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 TMEM132CQ8N3T6 1108 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 GOLM1Q8NBJ4 401 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 MAGOHBQ96A72 148 aaKnown RBP21.63■■□□□ 1.05
MMP28-203ENST00000612672 FAR2Q96K12 515 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 TRIM54Q9BYV2 358 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 OR8D2Q9GZM6 311 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 SH2D2AQ9NP31 389 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 SACM1LQ9NTJ5 587 aa21.63■■□□□ 1.05
MMP28-203ENST00000612672 ETHE1O95571 254 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 IFNA16P05015 189 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 STXBP1P61764 594 aaKnown RBP21.62■■□□□ 1.05
MMP28-203ENST00000612672 LTBQ06643 244 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 ZNF460Q14592 562 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 ADPRMQ3LIE5 342 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 FLYWCH1Q4VC44 716 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 RNASEH2BQ5TBB1 312 aaKnown RBP21.62■■□□□ 1.05
MMP28-203ENST00000612672 POMZP3Q6PJE2 187 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 SLC2A12Q8TD20 617 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 CCT6BQ92526 530 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 MBD6Q96DN6 1003 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 SLC6A15Q9H2J7 730 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 ZNF703Q9H7S9 590 aaPredicted RBP21.62■■□□□ 1.05
MMP28-203ENST00000612672 PROK2Q9HC23 129 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 VTI1BQ9UEU0 232 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 DAPP1Q9UN19 280 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 CLCA3PQ9Y6N3 262 aa21.62■■□□□ 1.05
MMP28-203ENST00000612672 TRGV5A0A0B4J1U4 118 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 PABPN1LA6NDY0 278 aaKnown RBP21.61■■□□□ 1.05
MMP28-203ENST00000612672 LRRC3CA6NJW4 275 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 CLDN4O14493 209 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 B3GALT2O43825 422 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 LDB3O75112 727 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 ATE1O95260 518 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 FOSL1P15407 271 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 SLC6A12P48065 614 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 ID2Q02363 134 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 SLC10A1Q14973 349 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 WLSQ5T9L3 541 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 TEDDM1Q5T9Z0 273 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 TRMT10BQ6PF06 316 aaKnown RBP21.61■■□□□ 1.05
MMP28-203ENST00000612672 LYPD8Q6UX82 237 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 GAS2L3Q86XJ1 694 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 ULK2Q8IYT8 1036 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 MORN4Q8NDC4 146 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 SARAFQ96BY9 339 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 CERS2Q96G23 380 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 PDLIM5Q96HC4 596 aaKnown RBP21.61■■□□□ 1.05
MMP28-203ENST00000612672 CAPZA3Q96KX2 299 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 WDR83Q9BRX9 315 aaKnown RBP21.61■■□□□ 1.05
MMP28-203ENST00000612672 ALOXE3Q9BYJ1 711 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 LDAHQ9H6V9 325 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 VWA7Q9Y334 891 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 KCNE2Q9Y6J6 123 aa21.61■■□□□ 1.05
MMP28-203ENST00000612672 C17orf105B2RV13 164 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 SYT5O00445 386 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 CTNSO60931 367 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 C1GALT1C1LP0DN25 315 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 ZNF37AP17032 561 aaPredicted RBP21.6■■□□□ 1.05
MMP28-203ENST00000612672 DGKQP52824 942 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 ABHD17CQ6PCB6 329 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 CCDC137Q6PK04 289 aaKnown RBP21.6■■□□□ 1.05
MMP28-203ENST00000612672 TMIGD1Q6UXZ0 262 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 ZNF793Q6ZN11 406 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 GALNT7Q86SF2 657 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 TNIP2Q8NFZ5 429 aa21.6■■□□□ 1.05
MMP28-203ENST00000612672 OR2L5Q8NG80 312 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms