RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 TMEM265A0A087WTH1 108 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 PIPSLA2A3N6 862 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 GPR37L1O60883 481 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 PCCBP05166 539 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 C1GALT1C1LP0DN25 315 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 ETFAP13804 333 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 HOXB2P14652 356 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 CD36P16671 472 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 TAS2R38P59533 333 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 NCS1P62166 190 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 SCARB2Q14108 478 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 SLBPQ14493 270 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDH1-213ENST00000612417 HIST2H2ACQ16777 129 aaPredicted RBP14.03□□□□□ -0.16
CDH1-213ENST00000612417 TRIM16LQ309B1 348 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 CATSPEREQ5SY80 951 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 FAM71E1Q6IPT2 247 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 ZNF852Q6ZMS4 543 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 ADCK1Q86TW2 530 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 LRRC56Q8IYG6 542 aaPredicted RBP14.03□□□□□ -0.16
CDH1-213ENST00000612417 SYTL1Q8IYJ3 562 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 DNAJC22Q8N4W6 341 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 IL17RCQ8NAC3 791 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 PLA2G15Q8NCC3 412 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 OR10G2Q8NGC3 310 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 OR4K1Q8NGD4 311 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 RHOXF1Q8NHV9 184 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 SLC38A4Q969I6 547 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 TAMM41Q96BW9 452 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 PSD2Q9BQI7 771 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 COPS4Q9BT78 406 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 MKRN2Q9H000 416 aaKnown RBP14.03□□□□□ -0.16
CDH1-213ENST00000612417 SLC6A17Q9H1V8 727 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 C8orf33Q9H7E9 229 aaPredicted RBP14.03□□□□□ -0.16
CDH1-213ENST00000612417 C1GALT1Q9NS00 363 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 FBXL12Q9NXK8 326 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 OSGIN1Q9UJX0 560 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 SH2B3Q9UQQ2 575 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 DYRK1BQ9Y463 629 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 TESMINQ9Y4I5 508 aa14.03□□□□□ -0.16
CDH1-213ENST00000612417 TOR1BO14657 336 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 C6orf47O95873 294 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 DNTTP04053 509 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 LCKP06239 509 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 ASGR2P07307 311 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 ITGA2P17301 1181 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 DRD1P21728 446 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 CDH3P22223 829 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 ALDH4A1P30038 563 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 PIK3CBP42338 1070 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 LSM3P62310 102 aaKnown RBP14.02□□□□□ -0.16
CDH1-213ENST00000612417 MICAQ29983 383 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 CRB2Q5IJ48 1285 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 TRIM40Q6P9F5 258 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 METTL4Q8N3J2 472 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 SLC5A8Q8N695 610 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 ZBTB8BQ8NAP8 495 aaPredicted RBP14.02□□□□□ -0.16
CDH1-213ENST00000612417 MYDGFQ969H8 173 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 PPCDCQ96CD2 204 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 KCNC2Q96PR1 638 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 TRIM39Q9HCM9 518 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 PCDHGA2Q9Y5H1 932 aa14.02□□□□□ -0.16
CDH1-213ENST00000612417 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 ADAM23O75077 832 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 KLHL18O94889 574 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 BMP4P12644 408 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 UGT2B10P36537 528 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 TUBA1BP68363 451 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 CYP2A13Q16696 494 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 ZNF630Q2M218 657 aaPredicted RBP14.02□□□□□ -0.17
CDH1-213ENST00000612417 MPEG1Q2M385 716 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 TUBA1AQ71U36 451 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 LSM14AQ8ND56 463 aaKnown RBP14.02□□□□□ -0.17
CDH1-213ENST00000612417 DENND6BQ8NEG7 585 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 OR9A1PQ8NGU1 263 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 OR14C36Q8NHC7 312 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 C16orf78Q8WTQ4 265 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 KLK6Q92876 244 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 DACH2Q96NX9 599 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 GABRG3Q99928 467 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 NEURL2Q9BR09 285 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 ALOXE3Q9BYJ1 711 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 TAS2R9Q9NYW1 312 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 SELENONQ9NZV5 590 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 DAPK2Q9UIK4 370 aa14.02□□□□□ -0.17
CDH1-213ENST00000612417 PRAMEF25A6NGN4 478 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 CLCA1A8K7I4 914 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 EFCAB9A8MZ26 197 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 MBTPS2O43462 519 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 CDK1P06493 297 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 GABRB1P18505 474 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 LIMS1P48059 325 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 HMGA2P52926 109 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 PCBP3P57721 371 aaKnown RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 TAP2Q03519 686 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 SMAD4Q13485 552 aaKnown RBP14.01□□□□□ -0.17
CDH1-213ENST00000612417 HIST2H2AA3Q6FI13 130 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 PNCKQ6P2M8 343 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 ANGPTL8Q6UXH0 198 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 UNC5DQ6UXZ4 953 aa14.01□□□□□ -0.17
CDH1-213ENST00000612417 IKBIPQ70UQ0 350 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms