RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 RBM20Q5T481 1227 aaKnown RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 FAM45BPQ6NSW5 357 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 FRA10AC1Q70Z53 315 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 CLNKQ7Z7G1 428 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 BIVMQ86UB2 503 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 CDC20BQ86Y33 519 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 LIX1LQ8IVB5 337 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 PPIL6Q8IXY8 311 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 SPC24Q8NBT2 197 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 OR8K3Q8NH51 312 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 FAM45AQ8TCE6 357 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 GRK7Q8WTQ7 553 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 SREK1Q8WXA9 508 aaKnown RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 SERINC2Q96SA4 455 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 NAP1L3Q99457 506 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 GSX1Q9H4S2 264 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 CRIM1Q9NZV1 1036 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 FOXD3Q9UJU5 478 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
HDDC2-203ENST00000608284 LIPGQ9Y5X9 500 aa14.64□□□□□ -0.07
HDDC2-203ENST00000608284 HCFC1P51610 2035 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 LRIT2A6NDA9 550 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 HK2P52789 917 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 MTTPP55157 894 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 RNF4P78317 190 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 KCTD19Q17RG1 926 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-203ENST00000608284 HYAL4Q2M3T9 481 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 FLYWCH1Q4VC44 716 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 SLC22A10Q63ZE4 541 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 RTL6Q6ICC9 239 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 TAOK1Q7L7X3 1001 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 KIF18BQ86Y91 864 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 FBXW8Q8N3Y1 598 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 NKAPQ8N5F7 415 aaKnown RBP14.63□□□□□ -0.07
HDDC2-203ENST00000608284 MBD6Q96DN6 1003 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 MS4A6EQ96DS6 147 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 PDLIM5Q96HC4 596 aaKnown RBP14.63□□□□□ -0.07
HDDC2-203ENST00000608284 SCYL1Q96KG9 808 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 RUNDC3BQ96NL0 473 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 ROGDIQ9GZN7 287 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 PITHD1Q9GZP4 211 aaPredicted RBP14.63□□□□□ -0.07
HDDC2-203ENST00000608284 REXO4Q9GZR2 422 aaKnown RBP14.63□□□□□ -0.07
HDDC2-203ENST00000608284 LIME1Q9H400 295 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 LZTFL1Q9NQ48 299 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 VTI1BQ9UEU0 232 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 PCDHGB3Q9Y5G1 929 aa14.63□□□□□ -0.07
HDDC2-203ENST00000608284 ACANP16112 2415 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 A0A0G2JMM0 328 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 A0A1W2PPB8 328 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 A0A1W2PRS3 328 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 KIR3DP1A8MWS1 328 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 C17orf105B2RV13 164 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 CLEC3AO75596 197 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 RAF1P04049 648 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 ADSLP30566 484 aaPredicted RBP14.62□□□□□ -0.07
HDDC2-203ENST00000608284 ADH7P40394 386 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 MAGEA3P43357 314 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 DNASE1L1P49184 302 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 ASCL1P50553 236 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 NR0B1P51843 470 aaKnown RBP14.62□□□□□ -0.07
HDDC2-203ENST00000608284 KCNJ2P63252 427 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 ADAM8P78325 824 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 CCDC137Q6PK04 289 aaKnown RBP14.62□□□□□ -0.07
HDDC2-203ENST00000608284 MAATS1Q7Z4T9 603 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 GALNT7Q86SF2 657 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.62□□□□□ -0.073e-6■■■■■ 69.6
HDDC2-203ENST00000608284 NAT8LQ8N9F0 302 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 OR2L5Q8NG80 312 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 SLC22A8Q8TCC7 542 aa14.62□□□□□ -0.07
HDDC2-203ENST00000608284 RNASE6Q93091 150 aaKnown RBP14.62□□□□□ -0.07
HDDC2-203ENST00000608284 TUBA8Q9NY65 449 aaPredicted RBP14.62□□□□□ -0.07
HDDC2-203ENST00000608284 AKAP6Q13023 2319 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 A0A1B0GTL3 188 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 CLGNO14967 610 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 WDR47O94967 919 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 BMP5P22003 454 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 GABRB3P28472 473 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 LIM2P55344 173 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 LTBQ06643 244 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SNTB1Q13884 538 aaKnown RBP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SLBPQ14493 270 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 PPP1R7Q15435 360 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 HIST2H2ACQ16777 129 aaPredicted RBP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 MPEG1Q2M385 716 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 HIST2H2AA3Q6FI13 130 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 CNTN4Q8IWV2 1026 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 DND1Q8IYX4 353 aaKnown RBP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SRFBP1Q8NEF9 429 aaKnown RBP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SLC2A12Q8TD20 617 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 PTPMT1Q8WUK0 201 aaPredicted RBP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 ANKRD7Q92527 254 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SLCO2A1Q92959 643 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 CNPPD1Q9BV87 410 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 RBSNQ9H1K0 784 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 NT5DC2Q9H857 520 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 NEUROD4Q9HD90 331 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDDC2-203ENST00000608284 ATG4BQ9Y4P1 393 aa14.61□□□□□ -0.07
HDDC2-203ENST00000608284 DNAJC13O75165 2243 aa14.6□□□□□ -0.07
HDDC2-203ENST00000608284 ZNF407Q9C0G0 2248 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms