RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ADGRG5Q8IZF4 528 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 CLEC4FQ8N1N0 589 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 DNAJC22Q8N4W6 341 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 OR52E4Q8NGH9 312 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 PNPT1Q8TCS8 783 aaKnown RBP20.44■□□□□ 0.86
USP6NL-204ENST00000606752 AHCYL2Q96HN2 611 aaKnown RBP20.44■□□□□ 0.86
USP6NL-204ENST00000606752 TGM7Q96PF1 710 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 EPB41L1Q9H4G0 881 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 NLGN3Q9NZ94 848 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 MUC3AQ02505 3323 aa20.44■□□□□ 0.86
USP6NL-204ENST00000606752 TLCD2A6NGC4 264 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 SRPX2O60687 465 aaPredicted RBP20.43■□□□□ 0.86
USP6NL-204ENST00000606752 IL10P22301 178 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 HOXD12P35452 270 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 MLC1Q15049 377 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 HLA-BQ31612 363 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 C18orf63Q68DL7 685 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 ZCCHC8Q6NZY4 707 aaKnown RBP20.43■□□□□ 0.86
USP6NL-204ENST00000606752 LILRA2Q8N149 483 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 CD180Q99467 661 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 PKP2Q99959 881 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 DUSP23Q9BVJ7 150 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 SPATA9Q9BWV2 254 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 NEUROD4Q9HD90 331 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 AURKCQ9UQB9 309 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 USP34Q70CQ2 3546 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 GLOD5A6NK44 160 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 CASQ2O14958 399 aaPredicted RBP20.43■□□□□ 0.86
USP6NL-204ENST00000606752 PGRMC2O15173 223 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 HCRTR1O43613 425 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 B3GALT2O43825 422 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 KIF1CO43896 1103 aaKnown RBP20.43■□□□□ 0.86
USP6NL-204ENST00000606752 PRKRAO75569 313 aaKnown RBP20.43■□□□□ 0.86
USP6NL-204ENST00000606752 UQCRC2P22695 453 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 GFERP55789 205 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 OR1D5P58170 312 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 NKAIN2Q5VXU1 208 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 SLC48A1Q6P1K1 146 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 ERICH5Q6P6B1 374 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 KANSL1Q7Z3B3 1105 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 TMEM126BQ8IUX1 230 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 ZSCAN32Q9NX65 697 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 KCMF1Q9P0J7 381 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 PHF11Q9UIL8 331 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 RIMS3Q9UJD0 308 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 CES1P1Q9UKY3 287 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 SLC22A7Q9Y694 548 aa20.43■□□□□ 0.86
USP6NL-204ENST00000606752 TP53BP1Q12888 1972 aaPredicted RBP20.42■□□□□ 0.86
USP6NL-204ENST00000606752 IGHV1OR21-1A0A087WYE8 117 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 WASHC1A8K0Z3 465 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 TXNDC9O14530 226 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 CREG1O75629 220 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 CFIP05156 583 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 NR1D2Q14995 579 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 TRIP10Q15642 601 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 TBCELQ5QJ74 424 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 OR52N2Q8NGI0 321 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 SAP25Q8TEE9 199 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 CHRNA10Q9GZZ6 450 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 CXorf36Q9H7Y0 433 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 MS4A12Q9NXJ0 267 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 ANAPC2Q9UJX6 822 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 PADI4Q9UM07 663 aa20.42■□□□□ 0.86
USP6NL-204ENST00000606752 MRPS2Q9Y399 296 aaKnown RBP20.42■□□□□ 0.86
USP6NL-204ENST00000606752 KRT75O95678 551 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 IL1RNP18510 177 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 SOAT1P35610 550 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 CHI3L1P36222 383 aaPredicted RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 BUD31P41223 144 aaPredicted RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 PI4KAP42356 2102 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 MVDP53602 400 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 RUNX2Q13950 521 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 ADRM1Q16186 407 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 VMACQ2NL98 169 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 DEFB110Q30KQ9 67 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 RABEPKQ7Z6M1 372 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 GATAD2AQ86YP4 633 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 ZZZ3Q8IYH5 903 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 CEP76Q8TAP6 659 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 CHST8Q9H2A9 424 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 FSCN3Q9NQT6 498 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 GPATCH2Q9NW75 528 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 PSME2Q9UL46 239 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 DAPP1Q9UN19 280 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 SNX8Q9Y5X2 465 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 TNRC6BQ9UPQ9 1833 aaKnown RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 IGHV5-51A0A0C4DH38 117 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 YKT6O15498 198 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 HNRNPRO43390 633 aaKnown RBP20.41■□□□□ 0.86
USP6NL-204ENST00000606752 RETP07949 1114 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 NR2F6P10588 404 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 ALPPL2P10696 532 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 NTSP30990 170 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 LIM2P55344 173 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 GPLD1P80108 840 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 VAC14Q08AM6 782 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 ZNF528Q3MIS6 628 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 ANGPTL8Q6UXH0 198 aa20.41■□□□□ 0.86
USP6NL-204ENST00000606752 PTOV1Q86YD1 416 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms