RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCDHAC1Q9H158 963 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CHST8Q9H2A9 424 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SYNPO2LQ9H987 977 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC35C2Q9NQQ7 365 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC6A13Q9NSD5 602 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CCM2LQ9NUG4 571 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TMEM74BQ9NUR3 256 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GIMAP4Q9NUV9 329 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NKX1-2Q9UD57 310 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC6A14Q9UN76 642 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PLCL2Q9UPR0 1127 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KLHL20Q9Y2M5 609 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF451Q9Y4E5 1061 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PCDHGA5Q9Y5G8 931 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SPACA6W5XKT8 324 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RALGAPA1Q6GYQ0 2036 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RP1P56715 2156 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TCRBV5S2A0A599 114 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 DHRS12A0PJE2 317 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FITM1A5D6W6 292 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MYO1GB0I1T2 1018 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 H0Y3Z8 333 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 P2RX6O15547 441 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 HNRNPRO43390 633 aaKnown RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PEX1O43933 1283 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SDC3O75056 442 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CAPNS1P04632 268 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SP9P0CG40 484 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NR2F6P10588 404 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TYRP1P17643 537 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ENGP17813 658 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CERS1P27544 350 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 VHLP40337 213 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GABRA4P48169 554 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR4D2P58180 307 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MRPS22P82650 360 aaKnown RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MC1RQ01726 317 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FAM53BQ14153 422 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NR0B2Q15466 257 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MUM1Q2TAK8 710 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GTDC1Q4AE62 458 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GLYATQ6IB77 296 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR52E8Q6IFG1 317 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 FRMPD2BQ6IN97 320 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IRGCQ6NXR0 463 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BHLHB9Q6PI77 547 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 DNAJC14Q6Y2X3 702 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 DTWD1Q8N5C7 304 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 KCT2Q8NC54 265 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C7orf57Q8NEG2 295 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PIGKQ92643 395 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 AHCYL2Q96HN2 611 aaKnown RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RNF145Q96MT1 663 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IKZF5Q9H5V7 419 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TMEM38AQ9H6F2 299 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MAGIXQ9H6Y5 334 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 YY1AP1Q9H869 796 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PDE7BQ9NP56 450 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C8orf4Q9NR00 106 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CES1P1Q9UKY3 287 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PADI4Q9UM07 663 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 DAPP1Q9UN19 280 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 AP4S1Q9Y587 144 aa11.64□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LOC105369274A0A096LPK9 316 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 LOC102723532A0A0G2JNH3 316 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 A0A1W2PR48 441 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GALR3O60755 368 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CPSF4O95639 269 aaKnown RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 AIFM1O95831 613 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 C6orf47O95873 294 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ANKRD34CP0C6C1 535 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PVRP15151 417 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IL10P22301 178 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PCGF2P35227 344 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ANXA11P50995 505 aaKnown RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MANFP55145 182 aaKnown RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 PPP1CAP62136 330 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BTN3A2P78410 334 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 BNIP3Q12983 259 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 SRSF5Q13243 272 aaKnown RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 GAB1Q13480 694 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 RGNQ15493 299 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 VMACQ2NL98 169 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 HLA-BQ31612 363 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 CMPK2Q5EBM0 449 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 YOD1Q5VVQ6 348 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ANKRD26P1Q6NSI1 321 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MED25Q71SY5 747 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 ZNF761Q86XN6 746 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 MCATQ8IVS2 390 aaKnown RBP11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 OR4N4Q8N0Y3 316 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 METTL25Q8N6Q8 603 aa11.63□□□□□ -0.55
NEDD8-MDP1-203ENST00000604306 NEURL3Q96EH8 262 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms