RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 NINJ2Q9NZG7 142 aa19.75■□□□□ 0.75
PPFIA3-209ENST00000602783 MRPS33Q9Y291 106 aaKnown RBP19.75■□□□□ 0.75
PPFIA3-209ENST00000602783 ACOT9Q9Y305 439 aa19.75■□□□□ 0.75
PPFIA3-209ENST00000602783 CLDN16Q9Y5I7 305 aa19.75■□□□□ 0.75
PPFIA3-209ENST00000602783 CACNA1CQ13936 2221 aa19.75■□□□□ 0.75
PPFIA3-209ENST00000602783 E9PLN8 166 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 GPR143P51810 404 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 TBCCQ15814 346 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 ABHD17CQ6PCB6 329 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 MDGA2Q7Z553 956 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 CLNKQ7Z7G1 428 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 SERINC2Q96SA4 455 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 VKORC1Q9BQB6 163 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 CCDC77Q9BR77 488 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 SNX15Q9NRS6 342 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 OPTCQ9UBM4 332 aa19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 PPIEQ9UNP9 301 aaKnown RBP19.74■□□□□ 0.75
PPFIA3-209ENST00000602783 A0A087X1B8 175 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 A0A1B0GTH9 108 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 HMX2A2RU54 273 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 K7EPI3 171 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 ADAM10O14672 748 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 HS6ST1O60243 411 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 PRKNO60260 465 aaPredicted RBP19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 ZFAND5O76080 213 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 PHBP35232 272 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 MSH2P43246 934 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 KIR3DL1P43629 444 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 SSR4P51571 173 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 MTTPP55157 894 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 E2F2Q14209 437 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 HIST2H2ACQ16777 129 aaPredicted RBP19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 HIST2H2AA3Q6FI13 130 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 ZNF595Q8IYB9 648 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 EID3Q8N140 333 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 PHF10Q8WUB8 498 aaKnown RBP19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 ZNF592Q92610 1267 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 F2RL3Q96RI0 385 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 DMRTA2Q96SC8 542 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 CSF3RQ99062 836 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 MS4A8Q9BY19 250 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 TRIM8Q9BZR9 551 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 LIN28AQ9H9Z2 209 aaKnown RBP19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 PRM3Q9NNZ6 103 aa19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 YARS2Q9Y2Z4 477 aaKnown RBP19.73■□□□□ 0.75
PPFIA3-209ENST00000602783 MYOCOSA0A1B0GUC4 107 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 CYR61O00622 381 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 CDC40O60508 579 aaKnown RBP eCLIP19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 IFNA16P05015 189 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 C2P06681 752 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 PCNAP12004 261 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 PTGS2P35354 604 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 CASP2P42575 452 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 LIM2P55344 173 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 GPR85P60893 370 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 TGM3Q08188 693 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 FAM83EQ2M2I3 478 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 C16orf47Q6ZP98 133 aaPredicted RBP19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 CCDC91Q7Z6B0 441 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 ZNF295-AS1Q8N0V1 137 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 TMEM132CQ8N3T6 1108 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 NOA1Q8NC60 698 aaKnown RBP19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 C16orf52Q8NHV5 167 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 LURAP1Q96LR2 239 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 ACSS3Q9H6R3 686 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 ADAP2Q9NPF8 381 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 TIMMDC1Q9NPL8 285 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 KCMF1Q9P0J7 381 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 MTRF1LQ9UGC7 380 aaKnown RBP19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 DMGDHQ9UI17 866 aaKnown RBP19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 PPT2Q9UMR5 302 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 DAPP1Q9UN19 280 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 ERVK-11Q9UQG0 969 aa19.72■□□□□ 0.75
PPFIA3-209ENST00000602783 SYCE1LA8MT33 242 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 TPOP07202 933 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 MTHFD2P13995 350 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 SERPINB8P50452 374 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 CMPK2Q5EBM0 449 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 LAS2Q8IYD9 372 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 MMGT1Q8N4V1 131 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 ZFP62Q8NB50 900 aaPredicted RBP19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 RHEBL1Q8TAI7 183 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 FAM57AQ8TBR7 257 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 ZNF473Q8WTR7 871 aaKnown RBP19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 SREK1Q8WXA9 508 aaKnown RBP19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 UBE2E3Q969T4 207 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 SDCCAG3Q96C92 435 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 KCNC2Q96PR1 638 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 ALOXE3Q9BYJ1 711 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 CDC42EP4Q9H3Q1 356 aaKnown RBP19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 PRDM7Q9NQW5 492 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 CLCA3PQ9Y6N3 262 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 PDZD2O15018 2839 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 DCHS2Q6V1P9 2916 aa19.71■□□□□ 0.75
PPFIA3-209ENST00000602783 TEP1Q99973 2627 aaKnown RBP19.7■□□□□ 0.74
PPFIA3-209ENST00000602783 A0A096LPK6 155 aa19.7■□□□□ 0.74
PPFIA3-209ENST00000602783 TMEM200CA6NKL6 621 aa19.7■□□□□ 0.74
PPFIA3-209ENST00000602783 A8MVJ9 347 aa19.7■□□□□ 0.74
PPFIA3-209ENST00000602783 CTNSO60931 367 aa19.7■□□□□ 0.74
PPFIA3-209ENST00000602783 SH3BGRLO75368 114 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms