RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 CD1DP15813 335 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 TNNI3P19429 210 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 CD22P20273 847 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 CAPN3P20807 821 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 SSTR1P30872 391 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 PAFAH1B1P43034 410 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 KCNC1P48547 511 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 HK2P52789 917 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.45
RPS28-204ENST00000602140 IRF8Q02556 426 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 TGM3Q08188 693 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 STX4Q12846 297 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 CBLBQ13191 982 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 PDK4Q16654 411 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 ZNF750Q32MQ0 723 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 EMC4Q5J8M3 183 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 CDKL4Q5MAI5 379 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 PAOXQ6QHF9 649 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 RPRMLQ8N4K4 120 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 ZNF321PQ8N8H1 164 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 MORN4Q8NDC4 146 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 OR14A16Q8NHC5 309 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 ASB5Q8WWX0 329 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 RND1Q92730 232 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 CDKL2Q92772 493 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 WDR34Q96EX3 536 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 KCNC2Q96PR1 638 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 KRT12Q99456 494 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 NAPGQ99747 312 aaPredicted RBP12.21□□□□□ -0.45
RPS28-204ENST00000602140 TREX2Q9BQ50 279 aaPredicted RBP12.21□□□□□ -0.45
RPS28-204ENST00000602140 EFCAB11Q9BUY7 163 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 OR8D2Q9GZM6 311 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 MCCC2Q9HCC0 563 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 PRM3Q9NNZ6 103 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 PTBP2Q9UKA9 531 aaKnown RBP12.21□□□□□ -0.45
RPS28-204ENST00000602140 RNF6Q9Y252 685 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 FAM90A27PA6NNH2 459 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 C17orf105B2RV13 164 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 NPIPA2E9PIF3 369 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 NPIPA3F8WFD2 350 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ACOT7O00154 380 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 RTCAO00442 366 aaKnown RBP12.2□□□□□ -0.46
RPS28-204ENST00000602140 CCNT2O60583 730 aaKnown RBP12.2□□□□□ -0.46
RPS28-204ENST00000602140 STMN1P16949 149 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 EPORP19235 508 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CHRNB4P30926 498 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 MSH2P43246 934 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ATP6V0D1P61421 351 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ID2Q02363 134 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 PMPCAQ10713 525 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CHIT1Q13231 466 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 LAPTM5Q13571 262 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 HIST2H2ACQ16777 129 aaPredicted RBP12.2□□□□□ -0.46
RPS28-204ENST00000602140 PAGE2BQ5JRK9 111 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 HIST2H2AA3Q6FI13 130 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ZNF793Q6ZN11 406 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 RGS9BPQ6ZS82 235 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 UBE3DQ7Z6J8 389 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CDH24Q86UP0 819 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 SLC22A16Q86VW1 577 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CCDC71Q8IV32 467 aaPredicted RBP12.2□□□□□ -0.46
RPS28-204ENST00000602140 PDPRQ8NCN5 879 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 BBOF1Q8ND07 529 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 SRFBP1Q8NEF9 429 aaKnown RBP12.2□□□□□ -0.46
RPS28-204ENST00000602140 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 SLC2A12Q8TD20 617 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 EXT2Q93063 718 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 KIAA1191Q96A73 305 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 SCYL1Q96KG9 808 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 GPR22Q99680 433 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 RBBP8Q99708 897 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CPNE1Q99829 537 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 MAPKAP1Q9BPZ7 522 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 MS4A8Q9BY19 250 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 TTTY12Q9BZ98 90 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 UCK2Q9BZX2 261 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ROGDIQ9GZN7 287 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 ZDHHC11Q9H8X9 412 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 LYRM4Q9HD34 91 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 SAYSD1Q9NPB0 183 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 RNF112Q9ULX5 631 aa12.2□□□□□ -0.46
RPS28-204ENST00000602140 CCDC168Q8NDH2 2452 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 TCRBV9S1A1TA0A576 114 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 FANCGO15287 622 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 SH3BGRLO75368 114 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 TGFB1P01137 390 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 S100BP04271 92 aaPredicted RBP12.19□□□□□ -0.46
RPS28-204ENST00000602140 IGFBP2P18065 325 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 CNR1P21554 472 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 ATP5A1P25705 553 aaKnown RBP12.19□□□□□ -0.46
RPS28-204ENST00000602140 GMPRP36959 345 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 RAB10P61026 200 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 RNF4P78317 190 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 SERTAD2Q14140 314 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 GXYLT1Q4G148 440 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 RTL4Q6ZR62 310 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 GK5Q6ZS86 529 aa12.19□□□□□ -0.46
RPS28-204ENST00000602140 ACOT4Q8N9L9 421 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms