RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 ZNF195O14628 629 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 LSM1O15116 133 aaKnown RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 GBAP04062 536 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 KITP10721 976 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 DLSTP36957 453 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 FOXL2P58012 376 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 KIAA0040Q15053 153 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 NR6A1Q15406 480 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 SPIN4Q56A73 249 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 VWA2Q5GFL6 755 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 SPDYAQ5MJ70 313 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 GALNT18Q6P9A2 607 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 CLEC18BQ6UXF7 455 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 MAVSQ7Z434 540 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 VASH2Q86V25 355 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 WDR75Q8IWA0 830 aaKnown RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 ENDOVQ8N8Q3 282 aaKnown RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 CLEC18CQ8NCF0 446 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 PIWIL2Q8TC59 973 aaKnown RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 STT3BQ8TCJ2 826 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 PEX11GQ96HA9 241 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 SPSB2Q99619 263 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 MAPKAP1Q9BPZ7 522 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 NUF2Q9BZD4 464 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 TGIF2Q9GZN2 237 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 WDR54Q9H977 334 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 LRTM1Q9HBL6 345 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 LYRM4Q9HD34 91 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 MKKSQ9NPJ1 570 aaPredicted RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 ZNF282Q9UDV7 671 aaPredicted RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 GIMAP2Q9UG22 337 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 GPN3Q9UHW5 284 aaPredicted RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 DAPP1Q9UN19 280 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 FARSAQ9Y285 508 aaKnown RBP17.77■□□□□ 0.44
CCDC9-205ENST00000600117 PCDHGA6Q9Y5G7 932 aa17.77■□□□□ 0.44
CCDC9-205ENST00000600117 CCDC88CQ9P219 2028 aa17.77■□□□□ 0.43
CCDC9-205ENST00000600117 ATP6AP2A0A1C7CYW4 349 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 HDAC3O15379 428 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 EDF1O60869 148 aaKnown RBP17.76■□□□□ 0.43
CCDC9-205ENST00000600117 JRKO75564 520 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 ATP6AP2O75787 350 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 KLF7O75840 302 aaPredicted RBP17.76■□□□□ 0.43
CCDC9-205ENST00000600117 BMP10O95393 424 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 KLK1P06870 262 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 RNH1P13489 461 aaKnown RBP17.76■□□□□ 0.43
CCDC9-205ENST00000600117 LIFP15018 202 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 XCR1P46094 333 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 HK2P52789 917 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 LIM2P55344 173 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 HNRNPH2P55795 449 aaKnown RBP17.76■□□□□ 0.43
CCDC9-205ENST00000600117 RAB38P57729 211 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 ACSM2AQ08AH3 577 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 SLAMF1Q13291 335 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 FAM69BQ5VUD6 431 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 ACSM2BQ68CK6 577 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 MED25Q71SY5 747 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 PAGE2Q7Z2X7 111 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 METTL2AQ96IZ6 378 aaKnown RBP17.76■□□□□ 0.43
CCDC9-205ENST00000600117 FCRL1Q96LA6 429 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 ADNPQ9H2P0 1102 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 MEAF6Q9HAF1 191 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 C1orf109Q9NX04 203 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 VTI1BQ9UEU0 232 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 ASB4Q9Y574 426 aa17.76■□□□□ 0.43
CCDC9-205ENST00000600117 NUP210LQ5VU65 1888 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 SPENQ96T58 3664 aaKnown RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 SLCO1B7G3V0H7 640 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 ZGLP1P0C6A0 271 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 FAM58BPP0C7Q3 252 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 PTPN4P29074 926 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 TIA1P31483 386 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 EFNA3P52797 238 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 RPS18P62269 152 aaKnown RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 ERV3-1Q14264 604 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 CCNYL2Q5T2Q4 361 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 TBC1D20Q96BZ9 403 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 PPP1R36Q96LQ0 422 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 OR1F2PQ96R84 312 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 CSF3RQ99062 836 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 YIPF2Q9BWQ6 316 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 GPR87Q9BY21 358 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 RBCK1Q9BYM8 510 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 GPN2Q9H9Y4 310 aaPredicted RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 PFDN4Q9NQP4 134 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 LANCL2Q9NS86 450 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 C14orf105Q9NVL8 296 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 RIC8BQ9NVN3 520 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 LYARQ9NX58 379 aaKnown RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 MCM8Q9UJA3 840 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 NXT1Q9UKK6 140 aaKnown RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 FBXW2Q9UKT8 454 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 ATG4BQ9Y4P1 393 aa17.75■□□□□ 0.43
CCDC9-205ENST00000600117 MRPS18BQ9Y676 258 aaKnown RBP17.75■□□□□ 0.43
CCDC9-205ENST00000600117 LRBAP50851 2863 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 PRRC2CQ9Y520 2896 aaKnown RBP17.74■□□□□ 0.43
CCDC9-205ENST00000600117 FAM227AF5H4B4 570 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 CYR61O00622 381 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 SDHDO14521 159 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 PCDH7O60245 1069 aa17.74■□□□□ 0.43
CCDC9-205ENST00000600117 SEC22BO75396 215 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms