RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ARMC10Q8N2F6 343 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 SNX31Q8N9S9 440 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 FAM47BQ8NA70 645 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 APCDD1LQ8NCL9 501 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 OR2L5Q8NG80 312 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 EPS8L3Q8TE67 593 aaKnown RBP17.48■□□□□ 0.39
PNKP-213ENST00000599543 KIAA1191Q96A73 305 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 EHD1Q9H4M9 534 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 NT5DC2Q9H857 520 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 COPS7BQ9H9Q2 264 aaPredicted RBP17.48■□□□□ 0.39
PNKP-213ENST00000599543 NMRAL1Q9HBL8 299 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 PRTFDC1Q9NRG1 225 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 ZNF180Q9UJW8 692 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 FBXW2Q9UKT8 454 aa17.48■□□□□ 0.39
PNKP-213ENST00000599543 KLF13Q9Y2Y9 288 aaPredicted RBP17.48■□□□□ 0.39
PNKP-213ENST00000599543 ADGRG4Q8IZF6 3080 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 DCHS2Q6V1P9 2916 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 GOLGA8RI6L899 631 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 TAPBPO15533 448 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 STK16O75716 305 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 S100BP04271 92 aaPredicted RBP17.47■□□□□ 0.39
PNKP-213ENST00000599543 GGT5P36269 586 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 HSPA7P48741 367 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 ADORA2A-AS1P86434 159 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 HSF1Q00613 529 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 PDK4Q16654 411 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 ZNF630Q2M218 657 aaPredicted RBP17.47■□□□□ 0.39
PNKP-213ENST00000599543 XKR6Q5GH73 641 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 CDKL4Q5MAI5 379 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 ADGRD1Q6QNK2 874 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 ZNF227Q86WZ6 799 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 ZNF595Q8IYB9 648 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 CYP4Z2PQ8N1L4 340 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 TMEM156Q8N614 296 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 VMP1Q96GC9 406 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 CCDC77Q9BR77 488 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 PRM3Q9NNZ6 103 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 RRAGDQ9NQL2 400 aaPredicted RBP17.47■□□□□ 0.39
PNKP-213ENST00000599543 MEMO1Q9Y316 297 aa17.47■□□□□ 0.39
PNKP-213ENST00000599543 SYNDIG1LA6NDD5 238 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 KLRC4-KLRK1H3BQV0 150 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 TFECO14948 347 aaPredicted RBP17.46■□□□□ 0.39
PNKP-213ENST00000599543 ITGA10O75578 1167 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 AGAP20933 346 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 CERS1P27544 350 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 MAGEA12P43365 314 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 MEOX1P50221 254 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 MTTPP55157 894 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 TGM3Q08188 693 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 RCN2Q14257 317 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 ADPRMQ3LIE5 342 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 RNFT1Q5M7Z0 435 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 CLNKQ7Z7G1 428 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 POGLUT1Q8NBL1 392 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 NCLNQ969V3 563 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 PTCD3Q96EY7 689 aaKnown RBP17.46■□□□□ 0.39
PNKP-213ENST00000599543 SCYL1Q96KG9 808 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 GPR78Q96P69 363 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 SERINC2Q96SA4 455 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 ATOH8Q96SQ7 321 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 EFCAB11Q9BUY7 163 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 ADAP2Q9NPF8 381 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 PSMC3IPQ9P2W1 217 aaPredicted RBP17.46■□□□□ 0.39
PNKP-213ENST00000599543 PPIEQ9UNP9 301 aaKnown RBP17.46■□□□□ 0.39
PNKP-213ENST00000599543 ASB1Q9Y576 335 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 FBN2P35556 2912 aa17.46■□□□□ 0.39
PNKP-213ENST00000599543 A0A1W2PPM1 405 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 LRRC14BA6NHZ5 514 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 PRRG2O14669 202 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 CCNT2O60583 730 aaKnown RBP17.45■□□□□ 0.38
PNKP-213ENST00000599543 KLHL2O95198 593 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 COX6B1P14854 86 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 PPP2R1BP30154 601 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 PTGER4P35408 488 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 HNRNPFP52597 415 aaKnown RBP17.45■□□□□ 0.38
PNKP-213ENST00000599543 DOC2AQ14183 400 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 FAM83EQ2M2I3 478 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 PAGE2BQ5JRK9 111 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 ADNP2Q6IQ32 1131 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 ABHD17CQ6PCB6 329 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 VN1R5Q7Z5H4 357 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 EID3Q8N140 333 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 PDPRQ8NCN5 879 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 TMEM52Q8NDY8 209 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 AGAP11Q8TF27 550 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.45■□□□□ 0.38
PNKP-213ENST00000599543 ISL2Q96A47 359 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 QRFPRQ96P65 431 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 TACC2O95359 2948 aa17.45■□□□□ 0.38
PNKP-213ENST00000599543 TLDC2A0PJX2 215 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 TGFBR3LH3BV60 316 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 ZNHIT1O43257 154 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 KERAO60938 352 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 TBX6O95947 436 aaPredicted RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 IFNA16P05015 189 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 SNRPB2P08579 225 aaKnown RBP17.44■□□□□ 0.38
PNKP-213ENST00000599543 CNTFP26441 200 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 SSR4P51571 173 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 LIM2P55344 173 aa17.44■□□□□ 0.38
PNKP-213ENST00000599543 LAPTM5Q13571 262 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms