RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SERPINI1Q99574 410 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 NPAS2Q99743 824 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 PARD6BQ9BYG5 372 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 PLA2G3Q9NZ20 509 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 STMN3Q9NZ72 180 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 TRPS1Q9UHF7 1281 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 TEKT2Q9UIF3 430 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 GRID1Q9ULK0 1009 aa19.73■□□□□ 0.75
PNKP-209ENST00000596726 PPIEQ9UNP9 301 aaKnown RBP19.73■□□□□ 0.75
PNKP-209ENST00000596726 A0A0A6YYD5 115 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 DYTNA2CJ06 578 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 SYNDIG1LA6NDD5 238 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 A8MUA0 341 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 A8MUI8 341 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 EEDO75530 441 aaKnown RBP19.72■□□□□ 0.75
PNKP-209ENST00000596726 WDPCPO95876 746 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 CPN2P22792 545 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 TNFSF10P50591 281 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 ARG2P78540 354 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 IFT88Q13099 833 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 ZNF169Q14929 603 aaPredicted RBP19.72■□□□□ 0.75
PNKP-209ENST00000596726 CCDC153Q494R4 210 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 TTC19Q6DKK2 380 aaPredicted RBP19.72■□□□□ 0.75
PNKP-209ENST00000596726 ZYG11AQ6WRX3 759 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 RIBC1Q8N443 379 aaPredicted RBP19.72■□□□□ 0.75
PNKP-209ENST00000596726 SNRNP40Q96DI7 357 aaKnown RBP19.72■□□□□ 0.75
PNKP-209ENST00000596726 ZNF382Q96SR6 550 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 MS4A12Q9NXJ0 267 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 LGALS13Q9UHV8 139 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 FBXW2Q9UKT8 454 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 RAB21Q9UL25 225 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 SPACA6W5XKT8 324 aa19.72■□□□□ 0.75
PNKP-209ENST00000596726 TLDC2A0PJX2 215 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 PLIN3O60664 434 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 OR4F21O95013 312 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 UQCRHP07919 91 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 KRT4P19013 534 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 PPP2R1BP30154 601 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 GPR143P51810 404 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 HNRNPH2P55795 449 aaKnown RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 ZNF33BQ06732 778 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 MEP1AQ16819 746 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ACER2Q5QJU3 275 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 FCRLBQ6BAA4 426 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 CLNKQ7Z7G1 428 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 GPR180Q86V85 440 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 CRLF3Q8IUI8 442 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 KIF2BQ8N4N8 673 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 MREGQ8N565 214 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 CISD2Q8N5K1 135 aaKnown RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 EFCAB3Q8N7B9 438 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 APCDD1LQ8NCL9 501 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ANKRD9Q96BM1 317 aaPredicted RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 CCDC126Q96EE4 140 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 CNDP1Q96KN2 507 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 BARD1Q99728 777 aaKnown RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 ROPN1BQ9BZX4 212 aaPredicted RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 GSTO2Q9H4Y5 243 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ELOVL6Q9H5J4 265 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 CLMPQ9H6B4 373 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ROPN1Q9HAT0 212 aaPredicted RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 ADAP2Q9NPF8 381 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 PNO1Q9NRX1 252 aaKnown RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 FARSBQ9NSD9 589 aaKnown RBP19.71■□□□□ 0.75
PNKP-209ENST00000596726 VTI1BQ9UEU0 232 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 PHF11Q9UIL8 331 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ATG4BQ9Y4P1 393 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 ASB4Q9Y574 426 aa19.71■□□□□ 0.75
PNKP-209ENST00000596726 PROM1O43490 865 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 TMPRSS11DO60235 418 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 LDB3O75112 727 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 MYO1DO94832 1006 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 MLYCDO95822 493 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 MYL2P10916 166 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 IGLV3-21P80748 117 aaPredicted RBP19.7■□□□□ 0.74
PNKP-209ENST00000596726 TNFRSF17Q02223 184 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 RPUSD3Q6P087 351 aaKnown RBP19.7■□□□□ 0.74
PNKP-209ENST00000596726 LGI4Q8N135 537 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 C4orf33Q8N1A6 199 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 SLC5A8Q8N695 610 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 B3GNT7Q8NFL0 401 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 C19orf60Q96EN9 201 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 ALOXE3Q9BYJ1 711 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 BRF2Q9HAW0 419 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 LYARQ9NX58 379 aaKnown RBP19.7■□□□□ 0.74
PNKP-209ENST00000596726 MKS1Q9NXB0 559 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 SNX6Q9UNH7 406 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 STK38LQ9Y2H1 464 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 NTNG1Q9Y2I2 539 aa19.7■□□□□ 0.74
PNKP-209ENST00000596726 RP1L1Q8IWN7 2480 aaPredicted RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 OR5H15A6NDH6 313 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 COPEO14579 308 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 MAN1A2O60476 641 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 PDYNP01213 254 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 FAM58BPP0C7Q3 252 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 TAS2R50P59544 299 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 SERTAD2Q14140 314 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 ELAVL1Q15717 326 aaKnown RBP19.69■□□□□ 0.74
PNKP-209ENST00000596726 SGO1Q5FBB7 561 aa19.69■□□□□ 0.74
PNKP-209ENST00000596726 FAM219BQ5XKK7 198 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms