RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SSR2P43308 183 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 MLF1P58340 268 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 RPS13P62277 151 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 IGLV3-21P80748 117 aaPredicted RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 TRAF3Q13114 568 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 SLC13A2Q13183 592 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 ZRSR2Q15696 482 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 ELAVL1Q15717 326 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
USE1-207ENST00000596136 EIF2S3LQ2VIR3 472 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 FHL5Q5TD97 284 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 MRM1Q6IN84 353 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 BCORP1Q8N888 145 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 MYRIPQ8NFW9 859 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 OR52B6Q8NGF0 335 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 DNAJB8Q8NHS0 232 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 ZNF483Q8TF39 744 aaPredicted RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 NSUN5Q96P11 429 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 UTP23Q9BRU9 249 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 CENPKQ9BS16 269 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 CDCP1Q9H5V8 836 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 DDX31Q9H8H2 851 aaKnown RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 ADAP2Q9NPF8 381 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 MS4A12Q9NXJ0 267 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 TMEM216Q9P0N5 145 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 ABI3Q9P2A4 366 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 PSMC3IPQ9P2W1 217 aaPredicted RBP12.19□□□□□ -0.46
USE1-207ENST00000596136 ICE1Q9Y2F5 2266 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 DOPEY1Q5JWR5 2465 aa12.19□□□□□ -0.46
USE1-207ENST00000596136 GABRR3A8MPY1 467 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 A8MUA0 341 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 NEURL1O76050 574 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 MYO1DO94832 1006 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 GSTA1P08263 222 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 PPP2R1BP30154 601 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 BSGP35613 385 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 CLCN2P51788 898 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 TDGF1P3P51864 188 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 CCNG1P51959 295 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 PHEXP78562 749 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 SLAMF1Q13291 335 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 BIKQ13323 160 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 SERTAD2Q14140 314 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 RASA2Q15283 850 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 ZNF766Q5HY98 468 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 FAM180AQ6UWF9 173 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 SH2D5Q6ZV89 423 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 TDRPQ86YL5 185 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 MYLK4Q86YV6 388 aaPredicted RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 TMEM132CQ8N3T6 1108 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 SUN3Q8TAQ9 357 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 PTPMT1Q8WUK0 201 aaPredicted RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 NR4A3Q92570 626 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 ATP6V1E2Q96A05 226 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 ANKRD9Q96BM1 317 aaPredicted RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 VMP1Q96GC9 406 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 SCMH1Q96GD3 660 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 MAGEB10Q96LZ2 347 aaPredicted RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 SIGLEC12Q96PQ1 595 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 PSMG3-AS1Q96PY0 264 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 CDK15Q96Q40 435 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 CCDC77Q9BR77 488 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 DEFB126Q9BYW3 111 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 ZNF223Q9UK11 482 aaPredicted RBP12.18□□□□□ -0.46
USE1-207ENST00000596136 ASB4Q9Y574 426 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 SPACA6W5XKT8 324 aa12.18□□□□□ -0.46
USE1-207ENST00000596136 A0A0A6YYD5 115 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 A0A1B0GTL3 188 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 SAP18O00422 153 aaKnown RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 PROM1O43490 865 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 SEMA7AO75326 666 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 SH3BGRLO75368 114 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 SEMA3DO95025 777 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 RASAL1O95294 804 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 ETHE1O95571 254 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 CPN2P22792 545 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 TPP2P29144 1249 aaPredicted RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 HSD17B3P37058 310 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 NEK2P51955 445 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 RAP1GDS1P52306 607 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 HERVK_113P63132 956 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 OR1C1Q15619 314 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 ZNF468Q5VIY5 522 aaPredicted RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 FRG2Q64ET8 278 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 MILR1Q7Z6M3 343 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 CLNKQ7Z7G1 428 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 GPR180Q86V85 440 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 ZNF227Q86WZ6 799 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 GSPT2Q8IYD1 628 aaKnown RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 MORN4Q8NDC4 146 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 OR4F6Q8NGB9 312 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 TANKQ92844 425 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 DAZLQ92904 295 aaKnown RBP12.17□□□□□ -0.46
USE1-207ENST00000596136 NCLNQ969V3 563 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 FRG2BQ96QU4 278 aa12.17□□□□□ -0.46
USE1-207ENST00000596136 SERPINI1Q99574 410 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms