RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 BSGP35613 385 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 CD96P40200 585 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ARFIP1P53367 373 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 TAS2R50P59544 299 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 SLAMF1Q13291 335 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 CUL3Q13618 768 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 TUBA3CQ13748 450 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 TUBA3EQ6PEY2 450 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 SH2D5Q6ZV89 423 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 LCA5Q86VQ0 697 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 RPS19BP1Q86WX3 136 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 LGI4Q8N135 537 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ARMC10Q8N2F6 343 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 FAM26EQ8N5C1 309 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 B3GNT7Q8NFL0 401 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ACMSDQ8TDX5 336 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF483Q8TF39 744 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ANKRD9Q96BM1 317 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 MTFMTQ96DP5 389 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 SIGLEC12Q96PQ1 595 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ALOXE3Q9BYJ1 711 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 SEMA4BQ9NPR2 832 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 AGPAT4Q9NRZ5 378 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 VTI1BQ9UEU0 232 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 ZNF223Q9UK11 482 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 FBXW2Q9UKT8 454 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 PPT2Q9UMR5 302 aa17.27■□□□□ 0.36
SHKBP1-202ENST00000593764 A0A1W2PPM1 405 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 FOXO6A8MYZ6 492 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 DLX3O60479 287 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 PRAMEF2O60811 474 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 LDB3O75112 727 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 EEDO75530 441 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 PYGBP11216 843 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 RAP1GDS1P52306 607 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 CDH13P55290 713 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF324BQ6AW86 544 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 MRM1Q6IN84 353 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ZCCHC7Q8N3Z6 543 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 MDS2Q8NDY4 140 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 OR4F6Q8NGB9 312 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 DDX31Q9H8H2 851 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ADAP2Q9NPF8 381 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ANKRD10Q9NXR5 420 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF225Q9UK10 706 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ATG4BQ9Y4P1 393 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ZGRF1Q86YA3 2104 aa17.26■□□□□ 0.35
SHKBP1-202ENST00000593764 ANKUB1A6NFN9 424 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 GABRR3A8MPY1 467 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 TSPAN8P19075 237 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 CPN2P22792 545 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 HSD17B3P37058 310 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 HNRNPH2P55795 449 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 MLF1P58340 268 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 HERVK_113P63132 956 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 PHEXP78562 749 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 ELAVL1Q15717 326 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 GGTA1PQ4G0N0 100 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 UNC50Q53HI1 259 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF468Q5VIY5 522 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 FAM219BQ5XKK7 198 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 FRG2Q64ET8 278 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 LETMD1Q6P1Q0 360 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 MILR1Q7Z6M3 343 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 GPR180Q86V85 440 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 CNPY4Q8N129 248 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 ST6GALNAC3Q8NDV1 305 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 PTPMT1Q8WUK0 201 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 UBLCP1Q8WVY7 318 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 FRG2BQ96QU4 278 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 SLX1AQ9BQ83 275 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 UTP23Q9BRU9 249 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 CENPKQ9BS16 269 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 ERVK-6Q9BXR3 956 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 ASB4Q9Y574 426 aa17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 USP9YO00507 2555 aaPredicted RBP17.25■□□□□ 0.35
SHKBP1-202ENST00000593764 A0A0A6YYD5 115 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TRBV11-1A0A0K0K1C0 115 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 BLACEA4D250 179 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 SYNDIG1LA6NDD5 238 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 PROM1O43490 865 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TMPRSS11DO60235 418 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 SEMA7AO75326 666 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 GSTA1P08263 222 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 TPP2P29144 1249 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 ARL1P40616 181 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 CLCN2P51788 898 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 IGLV3-21P80748 117 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 ID2Q02363 134 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 STX4Q12846 297 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 OR1C1Q15619 314 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 INAQ16352 499 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF766Q5HY98 468 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 ZNF678Q5SXM1 525 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 FHL5Q5TD97 284 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 C18orf63Q68DL7 685 aa17.24■□□□□ 0.35
SHKBP1-202ENST00000593764 SPINK14Q6IE38 97 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms