RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 AKR7A3O95154 331 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 DIRAS3O95661 229 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TSHBP01222 138 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 AMBPP02760 352 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 IGHV4-38-2P0DP08 117 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 ETS1P14921 441 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 PRKACBP22694 351 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CTNNA2P26232 953 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 RPA1P27694 616 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CCR1P32246 355 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SOAT1P35610 550 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CCT6AP40227 531 aaKnown RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 BLVRAP53004 296 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 MAP3K7CLP57077 242 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 NUCB2P80303 420 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SCGB2A2Q13296 93 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 PLD1Q13393 1074 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 NR1D2Q14995 579 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 MDH1BQ5I0G3 518 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TMEM31Q5JXX7 168 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 ARHGAP17Q68EM7 881 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TMEM211Q6ICI0 200 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 ARMCX2Q7L311 632 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 WDR49Q8IV35 697 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 PSTKQ8IV42 348 aaKnown RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 FOXP4Q8IVH2 680 aaPredicted RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TDHQ8IZJ6 230 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 PAPD5Q8NDF8 572 aaKnown RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 LPCAT1Q8NF37 534 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TRIM58Q8NG06 486 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 LILRB4Q8NHJ6 448 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CD99L2Q8TCZ2 262 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TAS1R2Q8TE23 839 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 NCLNQ969V3 563 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 HDAC11Q96DB2 347 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TMCO6Q96DC7 493 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 C14orf79Q96F83 325 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CATSPER2Q96P56 530 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 F2RL3Q96RI0 385 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 MYADMQ96S97 322 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 HNRNPABQ99729 332 aaKnown RBP4.47□□□□□ -1.69
SMAD4-216ENST00000593223 DPAGT1Q9H3H5 408 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 COQ10BQ9H8M1 238 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 ACKR4Q9NPB9 350 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SCRT2Q9NQ03 307 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SLC52A3Q9NQ40 469 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 RAB20Q9NX57 234 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 ANKMY1Q9P2S6 941 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 TRPC4Q9UBN4 977 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CCPG1Q9ULG6 757 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 GAB2Q9UQC2 676 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 GRIP1Q9Y3R0 1128 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 U3KQV3 271 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 SPACA6W5XKT8 324 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 CFAP54Q96N23 3096 aa4.47□□□□□ -1.69
SMAD4-216ENST00000593223 AFDNP55196 1824 aaKnown RBP4.46□□□□□ -1.69
SMAD4-216ENST00000593223 GPRIN2O60269 458 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 PRAMEF12O95522 483 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 POP4O95707 220 aaKnown RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 PDGFBP01127 241 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CSF2P04141 144 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 KRT6BP04259 564 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 FGF4P08620 206 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 UROSP10746 265 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 RALAP11233 206 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 AHCYP23526 432 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 DNASE1P24855 282 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CHRNB4P30926 498 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 RFC2P35250 354 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 WNT5AP41221 380 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 KRT6CP48668 564 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 RAB28P51157 221 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 PRRX1P54821 245 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CARD18P57730 90 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ABRQ12979 859 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 HNRNPDQ14103 355 aaKnown RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 KCTD21Q4G0X4 260 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 C1orf185Q5T7R7 199 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 NOTUMQ6P988 496 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 TEX38Q6PEX7 206 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF554Q86TJ5 538 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 VASH2Q86V25 355 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 COMTD1Q86VU5 262 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 COMMD2Q86X83 199 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CFAP206Q8IYR0 622 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ELMOD2Q8IZ81 293 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SFRP1Q8N474 314 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CPSF7Q8N684 471 aaKnown RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 NEK11Q8NG66 645 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SLC26A7Q8TE54 656 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 TMEM186Q96B77 213 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ZNF501Q96CX3 271 aaPredicted RBP4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SLC47A1Q96FL8 570 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 ART5Q96L15 291 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 USP28Q96RU2 1077 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 PKP2Q99959 881 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 RTP3Q9BQQ7 232 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 SIKE1Q9BRV8 207 aa4.46□□□□□ -1.7
SMAD4-216ENST00000593223 CARD6Q9BX69 1037 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms