RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 BRF2Q9HAW0 419 aa20.23■□□□□ 0.83
R3HDM4-206ENST00000590454 EML4Q9HC35 981 aaKnown RBP20.23■□□□□ 0.83
R3HDM4-206ENST00000590454 DNAJC15Q9Y5T4 150 aa20.23■□□□□ 0.83
R3HDM4-206ENST00000590454 ATP8B1O43520 1251 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 BMP10O95393 424 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 FGF4P08620 206 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 HIST1H1TP22492 207 aaPredicted RBP20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 GRK2P25098 689 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 PGDP52209 483 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 OCA2Q04671 838 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 KLC1Q07866 573 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 TBL3Q12788 808 aaKnown RBP20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 AP5B1Q2VPB7 878 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 NADK2Q4G0N4 442 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 OR2Y1Q8NGV0 311 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 MIEF2Q96C03 454 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 SERINC2Q96SA4 455 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 TRIM55Q9BYV6 548 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 WDR54Q9H977 334 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 MKKSQ9NPJ1 570 aaPredicted RBP20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 CCL27Q9Y4X3 112 aa20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 SPENQ96T58 3664 aaKnown RBP20.22■□□□□ 0.83
R3HDM4-206ENST00000590454 CREBBPQ92793 2442 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 B3GALT2O43825 422 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 TMPRSS11DO60235 418 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 CDC123O75794 336 aaPredicted RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 SCELO95171 688 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 TGM3Q08188 693 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 CSTF3Q12996 717 aaKnown RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 ZNF787Q6DD87 383 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 MAMDC2Q7Z304 686 aaPredicted RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 CLYBLQ8N0X4 340 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 METTL4Q8N3J2 472 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 TMEM52Q8NDY8 209 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 SRFBP1Q8NEF9 429 aaKnown RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 OR2T11Q8NH01 316 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 THAP4Q8WY91 577 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 APIPQ96GX9 242 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 CSF3RQ99062 836 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 MAPKAP1Q9BPZ7 522 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 SLC25A23Q9BV35 468 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 TGIF2Q9GZN2 237 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 MANSC1Q9H8J5 431 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 COPS7BQ9H9Q2 264 aaPredicted RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 LANCL2Q9NS86 450 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 KCMF1Q9P0J7 381 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 VPS29Q9UBQ0 182 aa20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 PCDHGA9Q9Y5G4 932 aaKnown RBP20.21■□□□□ 0.83
R3HDM4-206ENST00000590454 A0A0A6YYD5 115 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 SERTM1A2A2V5 107 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 SNNO75324 88 aaPredicted RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 SORBS2O94875 1100 aaKnown RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 SEMA3DO95025 777 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 JUNP05412 331 aaKnown RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 LINC00032P0C843 101 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 HSD3B1P14060 373 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 HSD3B2P26439 372 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 FOLR3P41439 243 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 HNRNPFP52597 415 aaKnown RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 LIM2P55344 173 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 BTKQ06187 659 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 SLAMF1Q13291 335 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 COMMD6Q7Z4G1 85 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 TRIM46Q7Z4K8 759 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 C1orf52Q8N6N3 182 aaKnown RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 CHTF18Q8WVB6 975 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 TWIST2Q8WVJ9 160 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 ZNF75CPQ92670 426 aaPredicted RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 DDX31Q9H8H2 851 aaKnown RBP20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 PNPOQ9NVS9 261 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 PADI2Q9Y2J8 665 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 NUP210LQ5VU65 1888 aa20.2■□□□□ 0.82
R3HDM4-206ENST00000590454 PIP5K1BO14986 540 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 B4GALT2O60909 372 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 KLK1P06870 262 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 RNH1P13489 461 aaKnown RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 COL8A1P27658 744 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 TPP2P29144 1249 aaPredicted RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 OTX2P32243 289 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 HNRNPH2P55795 449 aaKnown RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 SKP1P63208 163 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 RAE1P78406 368 aaKnown RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 EIF2S3LQ2VIR3 472 aaKnown RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 NIPAL1Q6NVV3 410 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 RIPOR1Q6ZS17 1223 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 GBP7Q8N8V2 638 aaPredicted RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 FAM47BQ8NA70 645 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 ADAMTS17Q8TE56 1095 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 TBC1D20Q96BZ9 403 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 CENPKQ9BS16 269 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 NPLQ9BXD5 320 aaPredicted RBP20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 VN1R1Q9GZP7 353 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 C3orf18Q9UK00 162 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 FBXW2Q9UKT8 454 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 MKL2Q9ULH7 1088 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 DAPP1Q9UN19 280 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 RAP2CQ9Y3L5 183 aa20.19■□□□□ 0.82
R3HDM4-206ENST00000590454 A0A088AWK7 358 aa20.18■□□□□ 0.82
R3HDM4-206ENST00000590454 IDSB3KWA1 339 aa20.18■□□□□ 0.82
R3HDM4-206ENST00000590454 TCP11X1B4DZS4 312 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms