RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 FGF17O60258 216 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 PRKNO60260 465 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 CTNSO60931 367 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 LDB3O75112 727 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 IMPDH1P20839 514 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ATP5F1P24539 256 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 PTX3P26022 381 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 TSFMP43897 325 aaKnown RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 PRKAA2P54646 552 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 CLCQ05315 142 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 SLC18A2Q05940 514 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF33BQ06732 778 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF468Q5VIY5 522 aaPredicted RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 C18orf63Q68DL7 685 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 MILR1Q7Z6M3 343 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 IQCKQ8N0W5 287 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ADAMTS18Q8TE60 1221 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ATP6V1E2Q96A05 226 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 ROGDIQ9GZN7 287 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 GSTO2Q9H4Y5 243 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 CLMPQ9H6B4 373 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 DDX31Q9H8H2 851 aaKnown RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 PNO1Q9NRX1 252 aaKnown RBP17.03■□□□□ 0.32
DDX39A-212ENST00000590260 STMN3Q9NZ72 180 aa17.03■□□□□ 0.32
DDX39A-212ENST00000590260 TMEM200CA6NKL6 621 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 TCP11X1B4DZS4 312 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.32
DDX39A-212ENST00000590260 PLIN3O60664 434 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 GLRA3O75311 464 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 MYO1DO94832 1006 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 SUPT7LO94864 414 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 PDYNP01213 254 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 GBAP04062 536 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 GNLYP22749 145 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ARFIP1P53367 373 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ARG2P78540 354 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 IGLV3-21P80748 117 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ID2Q02363 134 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 SLC13A2Q13183 592 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 TLR1Q15399 786 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 DGAT2L6Q6ZPD8 337 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF227Q86WZ6 799 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 OR4N5Q8IXE1 308 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 C4orf33Q8N1A6 199 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ARMC10Q8N2F6 343 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF321PQ8N8H1 164 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 OR1N1Q8NGS0 311 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 PTPMT1Q8WUK0 201 aaPredicted RBP17.02■□□□□ 0.32
DDX39A-212ENST00000590260 CAVIN3Q969G5 261 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 REPS1Q96D71 796 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 SIGLEC12Q96PQ1 595 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 TAAR6Q96RI8 345 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 PARD6BQ9BYG5 372 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 PPCSQ9HAB8 311 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 TRPS1Q9UHF7 1281 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 DCDC2Q9UHG0 476 aa17.02■□□□□ 0.32
DDX39A-212ENST00000590260 A0A1W2PR48 441 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 A0A1W2PS29 197 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 OR5H15A6NDH6 313 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 PROM1O43490 865 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 CDH16O75309 829 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 OTCP00480 354 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 CHN1P15882 459 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 KRT15P19012 456 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TAC1P20366 129 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 CPN2P22792 545 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TPP2P29144 1249 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-212ENST00000590260 CRHR1P34998 444 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ARL1P40616 181 aaPredicted RBP17.01■□□□□ 0.31
DDX39A-212ENST00000590260 HTR6P50406 440 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 RAP1GDS1P52306 607 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TNFRSF17Q02223 184 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 MRPL49Q13405 166 aaKnown RBP17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TUBA3CQ13748 450 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TERF2Q15554 542 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 SGO1Q5FBB7 561 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ABHD17BQ5VST6 288 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TUBA3EQ6PEY2 450 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ZYG11AQ6WRX3 759 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 GPR180Q86V85 440 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 GALNT11Q8NCW6 608 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 B3GNT7Q8NFL0 401 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 MYRIPQ8NFW9 859 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ZNF382Q96SR6 550 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 HBEGFQ99075 208 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 MRPL1Q9BYD6 325 aaKnown RBP17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ALOXE3Q9BYJ1 711 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 CDCP1Q9H5V8 836 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 TNFRSF12AQ9NP84 129 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 ADAP2Q9NPF8 381 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 VTI1BQ9UEU0 232 aa17.01■□□□□ 0.31
DDX39A-212ENST00000590260 FLNCQ14315 2725 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 CLDN4O14493 209 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 SEMA3DO95025 777 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 KRT4P19013 534 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 CD96P40200 585 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 AP2B1P63010 937 aa17■□□□□ 0.31
DDX39A-212ENST00000590260 SRSF11Q05519 484 aaKnown RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 GALNT1Q10472 559 aaPredicted RBP17■□□□□ 0.31
DDX39A-212ENST00000590260 TBL3Q12788 808 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms