RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 CKAP2Q8WWK9 683 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 HAS2Q92819 552 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 MS4A6EQ96DS6 147 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 LPAR4Q99677 370 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 CD244Q9BZW8 370 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 NECTIN3Q9NQS3 549 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 GPRC5BQ9NZH0 403 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 NUDT4Q9NZJ9 180 aa10.84□□□□□ -0.67
RFX1-204ENST00000588885 TRAV17A0A0B4J275 112 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 LRRC14BA6NHZ5 514 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 SMIM24O75264 130 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TBX6O95947 436 aaPredicted RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 CYC1P08574 325 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 PCNAP12004 261 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 MTHFD2P13995 350 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TAC1P20366 129 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 ATP5F1P24539 256 aaPredicted RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 AP2B1P63010 937 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 EXT1Q16394 746 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 HIST2H2ACQ16777 129 aaPredicted RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 CDKL4Q5MAI5 379 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 HIST2H2AA3Q6FI13 130 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 NIPAL1Q6NVV3 410 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 FAM180AQ6UWF9 173 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 MYLK4Q86YV6 388 aaPredicted RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 CRLF3Q8IUI8 442 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TEX9Q8N6V9 391 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 PTGR2Q8N8N7 351 aaPredicted RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 FAM47BQ8NA70 645 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TTLQ8NG68 377 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 M1APQ8TC57 530 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 FAR1Q8WVX9 515 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 SREK1Q8WXA9 508 aaKnown RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 GAL3ST3Q96A11 431 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 PTCD3Q96EY7 689 aaKnown RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 MAGEB18Q96M61 343 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 PSMG3-AS1Q96PY0 264 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TMEM237Q96Q45 408 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 TAAR6Q96RI8 345 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 BARD1Q99728 777 aaKnown RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 NPAS2Q99743 824 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 REXO4Q9GZR2 422 aaKnown RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 CCDC134Q9H6E4 229 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 NT5DC2Q9H857 520 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 PNO1Q9NRX1 252 aaKnown RBP10.83□□□□□ -0.68
RFX1-204ENST00000588885 TEKT2Q9UIF3 430 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 OSGIN2Q9Y236 505 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 SCN2AQ99250 2005 aa10.83□□□□□ -0.68
RFX1-204ENST00000588885 OR5H15A6NDH6 313 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 SYCE1LA8MT33 242 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 SAP18O00422 153 aaKnown RBP10.82□□□□□ -0.68
RFX1-204ENST00000588885 BIRC5O15392 142 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 B3GALT2O43825 422 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CLEC3AO75596 197 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 NEFHP12036 1026 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 GFAPP14136 432 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CERS1P27544 350 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 PPP2R1BP30154 601 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 LSP1P33241 339 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CD96P40200 585 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 HNRNPFP52597 415 aaKnown RBP10.82□□□□□ -0.68
RFX1-204ENST00000588885 SLC26A5P58743 744 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CBX1P83916 185 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 DDX39BQ13838 428 aaKnown RBP10.82□□□□□ -0.68
RFX1-204ENST00000588885 PFKFB4Q16877 469 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 PAGE2BQ5JRK9 111 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 LIPMQ5VYY2 423 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 LRRC70Q7Z2Q7 622 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CLNKQ7Z7G1 428 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 NUDCD3Q8IVD9 361 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 RNF175Q8N4F7 328 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 BCORP1Q8N888 145 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 TMEM52Q8NDY8 209 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 SUN3Q8TAQ9 357 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 PHF21BQ96EK2 531 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 ZNF354BQ96LW1 612 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 QRFPRQ96P65 431 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 EFCAB11Q9BUY7 163 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
RFX1-204ENST00000588885 CDCP1Q9H5V8 836 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 MMP25Q9NPA2 562 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 PRDM9Q9NQV7 894 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 KLHL1Q9NR64 748 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 OLAHQ9NV23 265 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 OPTCQ9UBM4 332 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 ERRFI1Q9UJM3 462 aaPredicted RBP10.82□□□□□ -0.68
RFX1-204ENST00000588885 ADAM21Q9UKJ8 722 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 ANGPTL3Q9Y5C1 460 aa10.82□□□□□ -0.68
RFX1-204ENST00000588885 CCDC189A1A4V9 331 aa10.81□□□□□ -0.68
RFX1-204ENST00000588885 K7EPI3 171 aa10.81□□□□□ -0.68
RFX1-204ENST00000588885 RTCAO00442 366 aaKnown RBP10.81□□□□□ -0.68
RFX1-204ENST00000588885 KLK8O60259 260 aa10.81□□□□□ -0.68
RFX1-204ENST00000588885 PRAMEF2O60811 474 aa10.81□□□□□ -0.68
RFX1-204ENST00000588885 SHOX2O60902 331 aaPredicted RBP10.81□□□□□ -0.68
RFX1-204ENST00000588885 LYPLA1O75608 230 aaPredicted RBP10.81□□□□□ -0.68
RFX1-204ENST00000588885 SIX3O95343 332 aaPredicted RBP10.81□□□□□ -0.68
RFX1-204ENST00000588885 DDAH2O95865 285 aa10.81□□□□□ -0.68
RFX1-204ENST00000588885 TGFB1P01137 390 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms