RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 TRIM49D1C9J1S8 452 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 RTCAO00442 366 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SMIM24O75264 130 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MLYCDO95822 493 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CYB561P49447 251 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 RAP1GDS1P52306 607 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 STX4Q12846 297 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 OR4C11Q6IEV9 310 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CLNKQ7Z7G1 428 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PTGR2Q8N8N7 351 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 L3MBTL4Q8NA19 623 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 FAM98AQ8NCA5 519 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 OR14A16Q8NHC5 309 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 DAZLQ92904 295 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 RGMAQ96B86 450 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SCYL1Q96KG9 808 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MAPKAP1Q9BPZ7 522 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CCDC77Q9BR77 488 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PLEKHB1Q9UF11 243 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PHF11Q9UIL8 331 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 OSGIN2Q9Y236 505 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 ASPDHA6ND91 283 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 LRRC14BA6NHZ5 514 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SLC25A12O75746 678 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 NEURL1O76050 574 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SIX3O95343 332 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CLDN9O95484 217 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SP1P08047 785 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 STSP08842 583 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SNRPAP09012 282 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 RNF224P0DH78 156 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CPN2P22792 545 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PTX3P26022 381 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PPP2R1BP30154 601 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 HLCSP50747 726 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 GPR143P51810 404 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CUL3Q13618 768 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CPSF6Q16630 551 aaKnown RBP eCLIP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 C10orf62Q5T681 223 aaPredicted RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 SLC25A25Q6KCM7 469 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 GFRALQ6UXV0 394 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 ZCCHC7Q8N3Z6 543 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MORN4Q8NDC4 146 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 NCLNQ969V3 563 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MTBPQ96DY7 904 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MTERF1Q99551 399 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MRPL57Q9BQC6 102 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 MRPL46Q9H2W6 279 aaKnown RBP13.48□□□□□ -0.25
DDX39A-208ENST00000588692 OR51B5Q9H339 312 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 KLHL1Q9NR64 748 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 ZNF358Q9NW07 568 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 VTI1BQ9UEU0 232 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 PPT2Q9UMR5 302 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 CLCA3PQ9Y6N3 262 aa13.48□□□□□ -0.25
DDX39A-208ENST00000588692 FOXE1O00358 373 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-208ENST00000588692 SAP18O00422 153 aaKnown RBP13.47□□□□□ -0.25
DDX39A-208ENST00000588692 PLPP1O14494 284 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 IFNA16P05015 189 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.47□□□□□ -0.257e-7■□□□□ 8.4
DDX39A-208ENST00000588692 LCA5Q86VQ0 697 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 WDR20Q8TBZ3 569 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 ATP6V1E2Q96A05 226 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 TMEM125Q96AQ2 219 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 PHF21BQ96EK2 531 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 NTMT1Q9BV86 223 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 NOL11Q9H8H0 719 aaKnown RBP13.47□□□□□ -0.25
DDX39A-208ENST00000588692 SEC14L3Q9UDX4 400 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 ZNF223Q9UK11 482 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-208ENST00000588692 PCTPQ9UKL6 214 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
DDX39A-208ENST00000588692 OR7A17O14581 309 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 LRRTM2O43300 516 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 RIPK2O43353 540 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 NME2P1O60361 137 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ITGA10O75578 1167 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ZFAND5O76080 213 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 UNC5CO95185 931 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 COX7A2P14406 83 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 NME2P22392 152 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 MST1P26927 711 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 TLX1P31314 330 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ARL1P40616 181 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 CCNG1P51959 295 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 RPS13P62277 151 aaKnown RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 IGLV3-21P80748 117 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 PMP22Q01453 160 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 RBPJQ06330 500 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 SLAMF1Q13291 335 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 BIKQ13323 160 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ZRSR2Q15696 482 aaKnown RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ZNF468Q5VIY5 522 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-208ENST00000588692 ADGRD1Q6QNK2 874 aa13.46□□□□□ -0.25
DDX39A-208ENST00000588692 TIFABQ6ZNK6 161 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms