RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 SLC5A6Q9Y289 635 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 KCNE2Q9Y6J6 123 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 CCDC88CQ9P219 2028 aa7.44□□□□□ -1.22
VMP1-204ENST00000587259 FER1L5A0AVI2 2057 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 LOC100653049A0A140TA62 436 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ATP6AP2A0A1C7CYW4 349 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 LRRC14BA6NHZ5 514 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 NRP2O60462 931 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 DNAJA2O60884 412 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 FKBP6O75344 327 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ATP6AP2O75787 350 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 KLF7O75840 302 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 KRT34O76011 436 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 C1orf105O95561 183 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 RAB40ALP0C0E4 278 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 LINC00032P0C843 101 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ITGAXP20702 1163 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 JAK1P23458 1154 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 PDHA2P29803 388 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 PRDX3P30048 256 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 SERPINB1P30740 379 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 CPA2P48052 419 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 CLNS1AP54105 237 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 FOXA1P55317 472 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 IRF8Q02556 426 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 TBL3Q12788 808 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 RCAN2Q14206 197 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 NCF4Q15080 339 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZIC1Q15915 447 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZNF658BQ4V348 819 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 CRB2Q5IJ48 1285 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 TMTC4Q5T4D3 741 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 C1orf146Q5VVC0 180 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 FBXW10Q5XX13 1052 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZNF385CQ66K41 422 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 TMEM198Q66K66 360 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 GRHL2Q6ISB3 625 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 AAGABQ6PD74 315 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 KLHL35Q6PF15 583 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 AGTRAPQ6RW13 159 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 MED25Q71SY5 747 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 KMT5CQ86Y97 462 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 MYLK4Q86YV6 388 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 TICAM1Q8IUC6 712 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 VRK3Q8IV63 474 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 DEFB107AQ8IZN7 70 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 POU5F2Q8N7G0 328 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 AMER2Q8N7J2 671 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 OR9A1PQ8NGU1 263 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 OR56A3Q8NH54 315 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 UTP4Q969X6 686 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 RCN3Q96D15 328 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 FERD3LQ96RJ6 166 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 KCNA7Q96RP8 456 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 CD180Q99467 661 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 HOPXQ9BPY8 73 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 EFCAB11Q9BUY7 163 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 SLC7A5P2Q9GIP4 190 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 PITHD1Q9GZP4 211 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 TUBB1Q9H4B7 451 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZNF552Q9H707 407 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 WDR41Q9HAD4 459 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 TNFRSF12AQ9NP84 129 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 SPAG4Q9NPE6 437 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 CCDC177Q9NQR7 707 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 CCDC167Q9P0B6 97 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 STOX2Q9P2F5 926 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 DHCR7Q9UBM7 475 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 ADGRE2Q9UHX3 823 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZNF225Q9UK10 706 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 ZNF490Q9ULM2 529 aaPredicted RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 OSGIN2Q9Y236 505 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 BTRCQ9Y297 605 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 B3GNT3Q9Y2A9 372 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 KLHL20Q9Y2M5 609 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 AP3M1Q9Y2T2 418 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 PTRH2Q9Y3E5 179 aaKnown RBP7.43□□□□□ -1.22
VMP1-204ENST00000587259 DYRK1BQ9Y463 629 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 TIMM22Q9Y584 194 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 PCDHGA11Q9Y5H2 935 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 HEBP2Q9Y5Z4 205 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 FBN2P35556 2912 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 OTOGQ6ZRI0 2925 aa7.43□□□□□ -1.22
VMP1-204ENST00000587259 A0A1W2PP18 115 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 FAM234BA2RU67 622 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 H0YIV9 168 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 MANBAO00462 879 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 MRASO14807 208 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 AIM2O14862 343 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 LSM1O15116 133 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 LRRTM2O43300 516 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 PRMT3O60678 531 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ZG16O60844 167 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 SLC22A3O75751 556 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 MYO1DO94832 1006 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 UMODP07911 640 aa7.42□□□□□ -1.22
VMP1-204ENST00000587259 ALDOCP09972 364 aaKnown RBP7.42□□□□□ -1.22
VMP1-204ENST00000587259 PRPS2P11908 318 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms