RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 P3H1Q32P28 736 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 C3orf38Q5JPI3 329 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 C9orf152Q5JTZ5 239 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TPRG1LQ5T0D9 272 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 FAM69AQ5T7M9 428 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ZDHHC20Q5W0Z9 365 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ALS2CLQ60I27 953 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PDPK2PQ6A1A2 396 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ETFRF1Q6IPR1 90 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 KDM7AQ6ZMT4 941 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MARK2Q7KZI7 788 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ZNF551Q7Z340 670 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 APLFQ8IW19 511 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SLC25A41Q8N5S1 370 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NANOGP1Q8N7R0 232 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GBP7Q8N8V2 638 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TRIM58Q8NG06 486 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SPATA22Q8NHS9 363 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ARRDC2Q8TBH0 407 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ACTL9Q8TC94 416 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 BLOC1S5Q8TDH9 187 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PIH1D2Q8WWB5 315 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MAIP1Q8WWC4 291 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 LZICQ8WZA0 190 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 OR1E3Q8WZA6 343 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NMD3Q96D46 503 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 DTNBP1Q96EV8 351 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 APOPT1Q96IL0 206 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 LYZL4Q96KX0 146 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 OR2M4Q96R27 311 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 LYSMD1Q96S90 227 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 NAP1L3Q99457 506 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 CCDC3Q9BQI4 270 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ZPBPQ9BS86 351 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ADI1Q9BV57 179 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RIOK2Q9BVS4 552 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SPATA16Q9BXB7 569 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 STRADBQ9C0K7 418 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TWSG1Q9GZX9 223 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GBA3Q9H227 469 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TCEAL2Q9H3H9 227 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 FAM83DQ9H4H8 585 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 OPA3Q9H6K4 179 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 GLOD4Q9HC38 313 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MAGEE1Q9HCI5 957 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 FGF22Q9HCT0 170 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 LZTFL1Q9NQ48 299 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 MRPL40Q9NQ50 206 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PRDM8Q9NQV8 689 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SIRT3Q9NTG7 399 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PNPOQ9NVS9 261 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TRNAU1APQ9NX07 287 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 VPS18Q9P253 973 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PACSIN2Q9UNF0 486 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SHOC2Q9UQ13 582 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 CDYLQ9Y232 598 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 RUVBL1Q9Y265 456 aaKnown RBP4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PPIL1Q9Y3C6 166 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 PKP3Q9Y446 797 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 ZNF292O60281 2723 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 CFAP54Q96N23 3096 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 SDK1Q7Z5N4 2213 aa4.52□□□□□ -1.69
ZNF540-204ENST00000586792 TRAV34A0A0B4J273 112 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 A0A1W2PQ09 198 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 A0A1W2PRV1 198 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 L7N2F9 121 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 PDLIM1O00151 329 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 STX7O15400 261 aaKnown RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 RRP8O43159 456 aaKnown RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 ZSCAN12O43309 604 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 CSO75390 466 aaKnown RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 GCATO75600 419 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 SUN1O94901 812 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 SLC25A14O95258 325 aaPredicted RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 MT-CO3P00414 261 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 PAHP00439 452 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 EPOP01588 193 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 TPOP07202 933 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 MMP2P08253 660 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 PIRTP0C851 137 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 RALBP11234 206 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 PRG2P13727 222 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 NPPBP16860 134 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 RBMS1P29558 406 aaKnown RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 SOX6P35712 828 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 TRIM23P36406 574 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 SPAM1P38567 509 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 ACTR1BP42025 376 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 THBS3P49746 956 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 ACTR1AP61163 376 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 C17orf67Q0P5P2 114 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 TARDBPQ13148 414 aaKnown RBP eCLIP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 RIPK1Q13546 671 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 DCTN2Q13561 401 aaKnown RBP4.51□□□□□ -1.69
ZNF540-204ENST00000586792 IL10RAQ13651 578 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 ITGA9Q13797 1035 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 CRYMQ14894 314 aa4.51□□□□□ -1.69
ZNF540-204ENST00000586792 TRADDQ15628 312 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms