RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 TNFRSF17Q02223 184 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 FAM47BQ8NA70 645 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 PLPP5Q8NEB5 264 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 C7orf57Q8NEG2 295 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 PRDM9Q9NQV7 894 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 RIC8BQ9NVN3 520 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 C1orf109Q9NX04 203 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 C19orf25Q9UFG5 118 aaPredicted RBP18.04■□□□□ 0.48
DDX39A-204ENST00000586558 FBXW2Q9UKT8 454 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 ASB4Q9Y574 426 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 PTGDR2Q9Y5Y4 395 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 HS3ST3B1Q9Y662 390 aa18.04■□□□□ 0.48
DDX39A-204ENST00000586558 SCN3AQ9NY46 2000 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 FAM227AF5H4B4 570 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 SLCO1B7G3V0H7 640 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 PEX12O00623 359 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 PCDH7O60245 1069 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 CDC123O75794 336 aaPredicted RBP18.03■□□□□ 0.48
DDX39A-204ENST00000586558 MYO1DO94832 1006 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 GBAP04062 536 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 C8orf89P0DMQ9 161 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 NR2F6P10588 404 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 ACPPP15309 386 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 TIA1P31483 386 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX39A-204ENST00000586558 HK2P52789 917 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 HNRNPH2P55795 449 aaKnown RBP18.03■□□□□ 0.48
DDX39A-204ENST00000586558 NR6A1Q15406 480 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 TMEM205Q6UW68 189 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 Q6ZSR9 355 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 TMEM151BQ8IW70 566 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 SCUBE1Q8IWY4 988 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 SHISA5Q8N114 240 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 CKAP2Q8WWK9 683 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 C19orf60Q96EN9 201 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 APIPQ96GX9 242 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 PPP3R2Q96LZ3 170 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 C7orf26Q96N11 449 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 CSF3RQ99062 836 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 PRORYQ9H606 182 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 WDR41Q9HAD4 459 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 LRTM1Q9HBL6 345 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 ATG4BQ9Y4P1 393 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 CELSR3Q9NYQ7 3312 aa18.03■□□□□ 0.48
DDX39A-204ENST00000586558 IGKV3D-11A0A0A0MRZ8 115 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 GNG14A0A1W2PPG7 69 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 PROM1O43490 865 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 SEC22BO75396 215 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 SKAP2O75563 359 aaPredicted RBP18.02■□□□□ 0.48
DDX39A-204ENST00000586558 FURINP09958 794 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 PPP2R1BP30154 601 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 BTKQ06187 659 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 NSDHLQ15738 373 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 ATP1A1-AS1Q5TC04 95 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 RGS9BPQ6ZS82 235 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 OR2T11Q8NH01 316 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 MAGEB18Q96M61 343 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 RPF2Q9H7B2 306 aaKnown RBP18.02■□□□□ 0.48
DDX39A-204ENST00000586558 PRTFDC1Q9NRG1 225 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 P4HTMQ9NXG6 502 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 VTI1BQ9UEU0 232 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 MAN2B2Q9Y2E5 1009 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 WBP11Q9Y2W2 641 aaKnown RBP18.02■□□□□ 0.48
DDX39A-204ENST00000586558 TMED5Q9Y3A6 229 aa18.02■□□□□ 0.48
DDX39A-204ENST00000586558 ZZEF1O43149 2961 aa18.02■□□□□ 0.47
DDX39A-204ENST00000586558 LOC102723996A0A087X1L8 192 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 A0A1W2PR48 441 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 SOCS6O14544 535 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 LSM1O15116 133 aaKnown RBP18.01■□□□□ 0.47
DDX39A-204ENST00000586558 CTNSO60931 367 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 ITGB2P05107 769 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 ANXA4P09525 319 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-204ENST00000586558 EFNA3P52797 238 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 RRADP55042 308 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 RAE1P78406 368 aaKnown RBP18.01■□□□□ 0.47
DDX39A-204ENST00000586558 SLC13A2Q13183 592 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 ATP1A4Q13733 1029 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 PDCD2Q16342 344 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-204ENST00000586558 KIRREL2Q6UWL6 708 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 GPR155Q7Z3F1 870 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 CRLF3Q8IUI8 442 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 OR11G2Q8NGC1 345 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 TANKQ92844 425 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 PTCHD1Q96NR3 888 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 FAIM2Q9BWQ8 316 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 PNPOQ9NVS9 261 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 NUP210LQ5VU65 1888 aa18.01■□□□□ 0.47
DDX39A-204ENST00000586558 DSPP15924 2871 aaKnown RBP18.01■□□□□ 0.47
DDX39A-204ENST00000586558 HDAC3O15379 428 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 VPS4BO75351 444 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 AIFM1O95831 613 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 MAOAP21397 527 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 HNRNPFP52597 415 aaKnown RBP18■□□□□ 0.47
DDX39A-204ENST00000586558 BTG2P78543 158 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 ZNF763Q0D2J5 394 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 BIKQ13323 160 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 KIAA0040Q15053 153 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 SMU1Q2TAY7 513 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 ATP6AP1LQ52LC2 224 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 NDUFAF5Q5TEU4 345 aa18■□□□□ 0.47
DDX39A-204ENST00000586558 FAAH2Q6GMR7 532 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms