RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MFAP5Q13361 173 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 PCLAFQ15004 111 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 SFT2D3Q587I9 215 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 MRM1Q6IN84 353 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF793Q6ZN11 406 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 UBE3DQ7Z6J8 389 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 AGAP11Q8TF27 550 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 PNPLA2Q96AD5 504 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 C8orf44Q96CB5 159 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 CNDP1Q96KN2 507 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF354BQ96LW1 612 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 ADAP2Q9NPF8 381 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 RALYQ9UKM9 306 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 A0A1B0GTL3 188 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 PPP6CO00743 305 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SUV39H1O43463 412 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 NPHS1O60500 1241 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 CDC123O75794 336 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SASH3O75995 380 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 GALNSP34059 522 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 BSGP35613 385 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SOX11P35716 441 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 CASRP41180 1078 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 FOXL2P58012 376 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SLC13A2Q13183 592 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 ELAVL1Q15717 326 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 BTBD16Q32M84 506 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SPIN4Q56A73 249 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 B3GNTL1Q67FW5 361 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 FAAH2Q6GMR7 532 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 H3F3CQ6NXT2 135 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 LANCL3Q6ZV70 420 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 HDXQ7Z353 690 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 GPR180Q86V85 440 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 TMEM132CQ8N3T6 1108 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 SLC5A8Q8N695 610 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 CCNYL1Q8N7R7 359 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 METTL6Q8TCB7 284 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 TANKQ92844 425 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 DAZLQ92904 295 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 ART5Q96L15 291 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 WDR77Q9BQA1 342 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 MECRQ9BV79 373 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF717Q9BY31 904 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 RBCK1Q9BYM8 510 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 KCMF1Q9P0J7 381 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 VPS29Q9UBQ0 182 aa12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 PPIEQ9UNP9 301 aaKnown RBP12.96□□□□□ -0.33
PRKCSH-202ENST00000585540 A0A0G2JN53 185 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 A6NL46 340 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 MANBAO00462 879 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 CRCPO75575 148 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 SEC24DO94855 1032 aaPredicted RBP12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 CHEK2O96017 543 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 B3GALT4O96024 378 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 UROSP10746 265 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 COX7A2P14406 83 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 ETV4P43268 484 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 EFNA3P52797 238 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 NAGLUP54802 743 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC26A5P58743 744 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 IGLV3-21P80748 117 aaPredicted RBP12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 STX4Q12846 297 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 SLAMF1Q13291 335 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 INAQ16352 499 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 MEP1AQ16819 746 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 ZNF605Q86T29 641 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 C10orf107Q8IVU9 208 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 PARP9Q8IXQ6 854 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 EFCAB3Q8N7B9 438 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 CDYL2Q8N8U2 506 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 FAM47BQ8NA70 645 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 OR14A16Q8NHC5 309 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 TSLPQ969D9 159 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 TLCD1Q96CP7 247 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 RPF2Q9H7B2 306 aaKnown RBP12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 MID1IP1Q9NPA3 183 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 SIRT5Q9NXA8 310 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 VTI1BQ9UEU0 232 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 ZNF225Q9UK10 706 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 WBP11Q9Y2W2 641 aaKnown RBP12.95□□□□□ -0.34
PRKCSH-202ENST00000585540 DOCK10Q96BY6 2186 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 RTCAO00442 366 aaKnown RBP12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 ZWINTO95229 277 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 PDYNP01213 254 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 FAM58BPP0C7Q3 252 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 NR2F6P10588 404 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 NEFHP12036 1026 aa12.94□□□□□ -0.34
PRKCSH-202ENST00000585540 ALDH3A1P30838 453 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms