RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NXPE4Q6UWF7 544 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCBE1Q6UXH8 406 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IKBIPQ70UQ0 350 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GPR65Q8IYL9 337 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CFAP206Q8IYR0 622 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZNF557Q8N988 423 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FAM46DQ8NEK8 389 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 APOBEC4Q8WW27 367 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC5A11Q8WWX8 675 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 VWCEQ96DN2 955 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NUAK2Q9H093 628 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ASAH2Q9NR71 780 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RABL2AQ9UBK7 228 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DKK3Q9UBP4 350 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ICKQ9UPZ9 632 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ASNA1O43681 348 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IL3P08700 152 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MAGP20916 626 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 UQCRC2P22695 453 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ALDH9A1P49189 494 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LIM2P55344 173 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NOGQ13253 232 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GRIN2CQ14957 1233 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LRIT3Q3SXY7 679 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 POM121L1PQ3SYA9 428 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DEPDC1Q5TB30 811 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LILRA6Q6PI73 481 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAGAPQ8N103 731 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OR9A1PQ8NGU1 263 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 WDR36Q8NI36 951 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CHAC2Q8WUX2 184 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PDXPQ96GD0 296 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CTRCQ99895 268 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MTG2Q9H4K7 406 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SLC25A19Q9HC21 320 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FZD3Q9NPG1 666 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ITM2CQ9NQX7 267 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SPHK2Q9NRA0 654 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 EHD3Q9NZN3 535 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TAAR2Q9P1P5 351 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TSC22D4Q9Y3Q8 395 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 N6AMT1Q9Y5N5 214 aa13.54□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LOC110117498-PIK3R3F6TDL0 507 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SYN1P17600 705 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DEFA1P59665 94 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DEFA3P59666 94 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC149Q6ZUS6 474 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NRSN1Q8IZ57 195 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PIK3R3Q92569 461 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SDHCQ99643 169 aaPredicted RBP13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LINC00597Q9H2U6 94 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MIEF1Q9NQG6 463 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 A0A075B6Q4 140 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TRBV4-1A0A0J9YWV2 114 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 FAM227AF5H4B4 570 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 DYRK3O43781 588 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LILRB5O75023 590 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 GPX5O75715 221 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ADAP00813 363 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SCG5P05408 212 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 POU1F1P28069 291 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NNMTP40261 264 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 TP53BP2Q13625 1128 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 BCL7AQ4VC05 210 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MMP21Q8N119 569 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZNF740Q8NDX6 193 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 OPALINQ96PE5 141 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NLNQ9BYT8 704 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CXorf36Q9H7Y0 433 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 REV1Q9UBZ9 1251 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 NDOR1Q9UHB4 597 aa13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LAMA2P24043 3122 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC88CQ9P219 2028 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CTDSP2O14595 271 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ENTPD6O75354 484 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 IRS1P35568 1242 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PCYT1AP49585 367 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SNRPGP62308 76 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 RHAGQ02094 409 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LY6G5CQ5SRR4 150 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CEACAM20Q6UY09 585 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ANKRD33Q7Z3H0 272 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CLIP4Q8N3C7 705 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HCAR2Q8TDS4 363 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 UBE2E3Q969T4 207 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 LRIG1Q96JA1 1093 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC32Q9BV29 185 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 ZBP1Q9H171 429 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 CCDC177Q9NQR7 707 aaPredicted RBP13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 HCFC1R1Q9NWW0 138 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 SNX8Q9Y5X2 465 aa13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.24
CDK5RAP3-237ENST00000585163 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP3-237ENST00000585163 TLR4O00206 839 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms