RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TGFB1P01137 390 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 STSP08842 583 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 CD46P15529 392 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 GCAP28676 217 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 TPP2P29144 1249 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 EEF1DP29692 281 aaKnown RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 CLCN2P51788 898 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 IGLV3-21P80748 117 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 CUL3Q13618 768 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 SERTAD2Q14140 314 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 AP5B1Q2VPB7 878 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 GGTA1PQ4G0N0 100 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 C4orf17Q53FE4 359 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 LGSNQ5TDP6 509 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 WDR20Q8TBZ3 569 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 RGMAQ96B86 450 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 SIGLEC12Q96PQ1 595 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 MAPKAP1Q9BPZ7 522 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 NTMT1Q9BV86 223 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 C1QTNF3Q9BXJ4 246 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 ZNF717Q9BY31 904 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 DEFB126Q9BYW3 111 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 MRPL46Q9H2W6 279 aaKnown RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 ZNF223Q9UK11 482 aaPredicted RBP12.28□□□□□ -0.44
ERBB2-220ENST00000584684 PCTPQ9UKL6 214 aa12.28□□□□□ -0.44
ERBB2-220ENST00000584684 DIDO1Q9BTC0 2240 aaKnown RBP12.27□□□□□ -0.44
ERBB2-220ENST00000584684 TRBV11-1A0A0K0K1C0 115 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 RTCAO00442 366 aaKnown RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 PLPP1O14494 284 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 FCHO1O14526 889 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 OR7A17O14581 309 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 NME2P1O60361 137 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 SMIM24O75264 130 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 SEMA3DO95025 777 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 CLDN9O95484 217 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 RPS17P08708 135 aaKnown RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 RNF224P0DH78 156 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 NME2P22392 152 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 PTX3P26022 381 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 PPP2R1BP30154 601 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 HLCSP50747 726 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 RAP1GDS1P52306 607 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 TRAF3Q13114 568 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 OR4C11Q6IEV9 310 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 ADGRD1Q6QNK2 874 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 MYLK4Q86YV6 388 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 TMEM132CQ8N3T6 1108 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 TMEM151AQ8N4L1 468 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 MORN4Q8NDC4 146 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 OR14A16Q8NHC5 309 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 DAZLQ92904 295 aaKnown RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 MTERF1Q99551 399 aaKnown RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 OR51B5Q9H339 312 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 CDCP1Q9H5V8 836 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 PNO1Q9NRX1 252 aaKnown RBP12.27□□□□□ -0.45
ERBB2-220ENST00000584684 LRFN1Q9P244 771 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 PHF11Q9UIL8 331 aa12.27□□□□□ -0.45
ERBB2-220ENST00000584684 A8MUA0 341 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 SLC25A12O75746 678 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 SP1P08047 785 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 SBK3P0C264 359 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 CYB561P49447 251 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 RPS13P62277 151 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 TNFRSF17Q02223 184 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 OC90Q02509 493 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 STX4Q12846 297 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 BIKQ13323 160 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 DDX39BQ13838 428 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ZRSR2Q15696 482 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 CPSF6Q16630 551 aaKnown RBP eCLIP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 SPINK14Q6IE38 97 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 MRM1Q6IN84 353 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 CLNKQ7Z7G1 428 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ZNF227Q86WZ6 799 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 OR52B6Q8NGF0 335 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 OR8K3Q8NH51 312 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 UHMK1Q8TAS1 419 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 PTPMT1Q8WUK0 201 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 NCLNQ969V3 563 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 PHF21BQ96EK2 531 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 SCYL1Q96KG9 808 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 FRMD6Q96NE9 622 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 CCDC77Q9BR77 488 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ALOXE3Q9BYJ1 711 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 EPB41L4BQ9H329 900 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 NOL11Q9H8H0 719 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 DDX31Q9H8H2 851 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 L2HGDHQ9H9P8 463 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ZBTB26Q9HCK0 441 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 LYARQ9NX58 379 aaKnown RBP12.26□□□□□ -0.45
ERBB2-220ENST00000584684 ANKRD10Q9NXR5 420 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 RNF11Q9Y3C5 154 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 CLCA3PQ9Y6N3 262 aa12.26□□□□□ -0.45
ERBB2-220ENST00000584684 A0A0A6YYD5 115 aa12.25□□□□□ -0.45
ERBB2-220ENST00000584684 A8MT66 165 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms