RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TOM1L2Q6ZVM7 507 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 STXBP4Q6ZWJ1 553 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 CYP4V2Q6ZWL3 525 aaPredicted RBP4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 MCM10Q7L590 875 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 CNTN4Q8IWV2 1026 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF440Q8IYI8 595 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 MGARPQ8TDB4 240 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 CHPT1Q8WUD6 406 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 SLC45A3Q96JT2 553 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 CXorf58Q96LI9 332 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 PARLQ9H300 379 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 PRSS21Q9Y6M0 314 aa4.62□□□□□ -1.67
SMARCE1-219ENST00000583294 A0A0U1RQG5 324 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 A0A1B0GU03 582 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 KRTAP16-1A8MUX0 517 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 A8MXK9 166 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 CSO75390 466 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 POP4O95707 220 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 CPNE6O95741 557 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 FERP16591 822 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 UGT1A6P19224 532 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ID1P41134 155 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ABCE1P61221 599 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 FKBP3Q00688 224 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 GALK2Q01415 458 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 AP1B1Q10567 949 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 PDE7AQ13946 482 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF146Q15072 292 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 UPP1Q16831 310 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 KNOP1Q1ED39 458 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 HFEQ30201 348 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF772Q68DY9 489 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF730Q6ZMV8 503 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 FAM131BQ86XD5 332 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 STHQ8IWL8 128 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 OR4N5Q8IXE1 308 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 FBXW8Q8N3Y1 598 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF485Q8NCK3 441 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 OR4A16Q8NH70 328 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 C8orf46Q8TAG6 207 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 SPPL2AQ8TCT8 520 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 PCED1BQ96HM7 432 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 TNFRSF13CQ96RJ3 184 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 SSX3Q99909 188 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 AGPAT1Q99943 283 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 PINK1Q9BXM7 581 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 WDR41Q9HAD4 459 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 MOB4Q9Y3A3 225 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 SNED1Q8TER0 1413 aa4.61□□□□□ -1.67
SMARCE1-219ENST00000583294 OR5H15A6NDH6 313 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 EPM2AB3EWF7 344 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 DDX39AO00148 427 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 PNPP00491 289 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 VDRP11473 427 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 GPX3P22352 226 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 FCGR2BP31994 310 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 FCGR2CP31995 323 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 RPL9P32969 192 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 CAPGP40121 348 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 NDUFV3P56181 108 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 RPS27AP62979 156 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 GFPT1Q06210 699 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 GABPAQ06546 454 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 CD300CQ08708 224 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 HEPACAMQ14CZ8 416 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 KRT31Q15323 416 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 STX1AQ16623 288 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 WSCD2Q2TBF2 565 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 CD164L2Q6UWJ8 174 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 WDR49Q8IV35 697 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 LRRC15Q8TF66 581 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 ALKBH3Q96Q83 286 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 TSPYL1Q9H0U9 437 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 AKAP7Q9P0M2 348 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 UMODL1Q5DID0 1318 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 CACNA1FO60840 1977 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 FER1L5A0AVI2 2057 aa4.6□□□□□ -1.67
SMARCE1-219ENST00000583294 ARHGEF33A8MVX0 844 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 TMCO5BA8MYB1 307 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 TRAFD1O14545 582 aaPredicted RBP4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 OGTO15294 1046 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 VEGFDO43915 354 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 ATP6V1G1O75348 118 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 HLA-DPA1P20036 260 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 STIP1P31948 543 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 FHITP49789 147 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 CCR4P51679 360 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 MS4A2Q01362 244 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 ECSCRQ19T08 205 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 PAQR6Q6TCH4 344 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 ZNF410Q86VK4 478 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 TBC1D10CQ8IV04 446 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 SIDT2Q8NBJ9 832 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 ATP6V0A1Q93050 837 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 SPATA13Q96N96 652 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 GAL3ST4Q96RP7 486 aa4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 RBM4BQ9BQ04 359 aaKnown RBP4.59□□□□□ -1.67
SMARCE1-219ENST00000583294 NUSAP1Q9BXS6 441 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms