RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 TPT1P8Q9HAU6 139 aa13.04□□□□□ -0.32
GGA3-214ENST00000582717 DDX28Q9NUL7 540 aaKnown RBP13.04□□□□□ -0.32
GGA3-214ENST00000582717 IMPAD1Q9NX62 359 aa13.04□□□□□ -0.32
GGA3-214ENST00000582717 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
GGA3-214ENST00000582717 CNOT2Q9NZN8 540 aaKnown RBP13.04□□□□□ -0.32
GGA3-214ENST00000582717 ENOPH1Q9UHY7 261 aa13.04□□□□□ -0.32
GGA3-214ENST00000582717 RANBP2P49792 3224 aaKnown RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 SH3D21A4FU49 640 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 H3BQ06 376 aaPredicted RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 QSOX1O00391 747 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 MFN2O95140 757 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 PAPLNO95428 1278 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 ABCB1P08183 1280 aaPredicted RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 COX7A2P14406 83 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 FCARP24071 287 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 CXCR2P25025 360 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 PDHA2P29803 388 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 ALDH9A1P49189 494 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 MRPS15P82914 257 aaKnown RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 CHIT1Q13231 466 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 CDK10Q15131 360 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 SOWAHCQ53LP3 525 aaPredicted RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 FRG2Q64ET8 278 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 Q6ZPB1 254 aaPredicted RBP13.03□□□□□ -0.32
GGA3-214ENST00000582717 RNF130Q86XS8 419 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 RNF175Q8N4F7 328 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 TMIEQ8NEW7 156 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 FRG2BQ96QU4 278 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 OR2A14Q96R47 310 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 FAM129BQ96TA1 746 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 RNF167Q9H6Y7 350 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 AMBNQ9NP70 447 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 ITM2CQ9NQX7 267 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 TBC1D24Q9ULP9 559 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 REV3LO60673 3130 aa13.03□□□□□ -0.32
GGA3-214ENST00000582717 CCRL2O00421 344 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 ITGA2P17301 1181 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 CD22P20273 847 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 PBX2P40425 430 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 HNF4AP41235 474 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 IDH2P48735 452 aaKnown RBP13.02□□□□□ -0.32
GGA3-214ENST00000582717 PRIM2P49643 509 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 NUDT6P53370 316 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 KCNC3Q14003 757 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 ELOAQ14241 798 aaKnown RBP13.02□□□□□ -0.32
GGA3-214ENST00000582717 ZNF658BQ4V348 819 aaPredicted RBP13.02□□□□□ -0.32
GGA3-214ENST00000582717 BCL7AQ4VC05 210 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.32
GGA3-214ENST00000582717 SLC5A8Q8N695 610 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 SAMD11Q96NU1 681 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 TRNT1Q96Q11 434 aaKnown RBP13.02□□□□□ -0.32
GGA3-214ENST00000582717 TMEM245Q9H330 911 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 SMURF1Q9HCE7 757 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 NDUFAF4Q9P032 175 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 BTNL2Q9UIR0 455 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 DUSP12Q9UNI6 340 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 MAPRE3Q9UPY8 281 aa13.02□□□□□ -0.32
GGA3-214ENST00000582717 MPZL2O60487 215 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 CPSF4O95639 269 aaKnown RBP13.02□□□□□ -0.33
GGA3-214ENST00000582717 DNTTP04053 509 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 C6P13671 934 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 ADRB3P13945 408 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 RPS5P46782 204 aaKnown RBP13.02□□□□□ -0.33
GGA3-214ENST00000582717 CRYBA2P53672 197 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 DMPKQ09013 629 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
GGA3-214ENST00000582717 NLRP8Q86W28 1048 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 THOC6Q86W42 341 aaKnown RBP13.02□□□□□ -0.33
GGA3-214ENST00000582717 OR8H2Q8N162 312 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 C11orf65Q8NCR3 313 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 NUS1Q96E22 293 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 DEPDC7Q96QD5 511 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 MGLLQ99685 303 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 MARCH7Q9H992 704 aa13.02□□□□□ -0.33
GGA3-214ENST00000582717 STOX2Q9P2F5 926 aaPredicted RBP13.02□□□□□ -0.33
GGA3-214ENST00000582717 DENND4AQ7Z401 1863 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 NPC1O15118 1278 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 MMP20O60882 483 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 LILRB5O75023 590 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 GUCY1B2O75343 617 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 JUPP14923 745 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 CAMK2BQ13554 666 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 TANGO2Q6ICL3 276 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 VITQ6UXI7 678 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 GDPGP1Q6ZNW5 385 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 ATCAYQ86WG3 371 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 B3GNT7Q8NFL0 401 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 SPPL2AQ8TCT8 520 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 METTL2AQ96IZ6 378 aaKnown RBP13.01□□□□□ -0.33
GGA3-214ENST00000582717 ST6GAL2Q96JF0 529 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 RACGAP1Q9H0H5 632 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 ZNF556Q9HAH1 456 aa13.01□□□□□ -0.33
GGA3-214ENST00000582717 PRDM8Q9NQV8 689 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms