RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MLF1	P58340	268 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	RBPJ	Q06330	500 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	STX4	Q12846	297 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR1C1	Q15619	314 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	FCRLB	Q6BAA4	426 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR4C11	Q6IEV9	310 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ADNP2	Q6IQ32	1131 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	GOLGA7	Q7Z5G4	137 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	GPALPP1	Q8IXQ4	340 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	MYRIP	Q8NFW9	859 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR8K3	Q8NH51	312 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR14A16	Q8NHC5	309 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	HUS1B	Q8NHY5	278 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TANK	Q92844	425 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NTMT1	Q9BV86	223 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CDCP1	Q9H5V8	836 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DMRT3	Q9NQL9	472 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	LRFN1	Q9P244	771 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CPSF2	Q9P2I0	782 aa	Known RBP	11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NFU1	Q9UMS0	254 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CLCA3P	Q9Y6N3	262 aa		11.76	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TRIM49D1	C9J1S8	452 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	POC1B-GALNT4	F8VUJ3	575 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NEURL1	O76050	574 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SEMA3D	O95025	777 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	LDLR	P01130	860 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TGFB1	P01137	390 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SP1	P08047	785 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TPP2	P29144	1249 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TLX1	P31314	330 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	HLCS	P50747	726 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	RAP1GDS1	P52306	607 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	IGLV3-21	P80748	117 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OC90	Q02509	493 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	GGTA1P	Q4G0N0	100 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	KRTCAP3	Q53RY4	240 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SLC25A25	Q6KCM7	469 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ADGRD1	Q6QNK2	874 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ZNF793	Q6ZN11	406 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	MYLK4	Q86YV6	388 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PLD6	Q8N2A8	252 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	FAM47B	Q8NA70	645 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	POGLUT1	Q8NBL1	392 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ACMSD	Q8TDX5	336 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	THAP3	Q8WTV1	239 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	11.75	□□□□□ -0.53	4e-10	■□□□□ 9.4
CDK5RAP3-222	ENST00000581708	RELT	Q969Z4	430 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TMEM125	Q96AQ2	219 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SERPINI1	Q99574	410 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	C1QTNF3	Q9BXJ4	246 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PPCS	Q9HAB8	311 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PRM3	Q9NNZ6	103 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PNO1	Q9NRX1	252 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	LYAR	Q9NX58	379 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	XPR1	Q9UBH6	696 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	YARS2	Q9Y2Z4	477 aa	Known RBP	11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ICE1	Q9Y2F5	2266 aa		11.75	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ZGRF1	Q86YA3	2104 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TRBV11-1	A0A0K0K1C0	115 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	RIPK2	O43353	540 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DYRK3	O43781	588 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NME2P1	O60361	137 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	F10	P00742	488 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	COX7A2	P14406	83 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	NME2	P22392	152 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CPN2	P22792	545 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	BUD31	P41223	144 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	CCNG1	P51959	295 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	HNRNPF	P52597	415 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SLAMF1	Q13291	335 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	UBAP2	Q5T6F2	1119 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	MTFR2	Q6P444	385 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	GPR180	Q86V85	440 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	KIF2B	Q8N4N8	673 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TMEM52	Q8NDY8	209 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR5L2	Q8NGL0	311 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	WDR20	Q8TBZ3	569 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ATP6V1E2	Q96A05	226 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SCYL1	Q96KG9	808 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SIGLEC12	Q96PQ1	595 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	MTERF1	Q99551	399 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	MAPKAP1	Q9BPZ7	522 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PELO	Q9BRX2	385 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	ALOXE3	Q9BYJ1	711 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TXLNGY	Q9BZA5	131 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR51B5	Q9H339	312 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	DDX31	Q9H8H2	851 aa	Known RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	AHSP	Q9NZD4	102 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SEC14L3	Q9UDX4	400 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PCTP	Q9UKL6	214 aa		11.74	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	IQANK1	A0A1B0GTG1	560 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708		A8MUA0	341 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	KLRC4-KLRK1	H3BQV0	150 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	TGFBR3L	H3BV60	316 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	PLPP1	O14494	284 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	OR7A17	O14581	309 aa		11.73	□□□□□ -0.53
CDK5RAP3-222	ENST00000581708	SLC25A12	O75746	678 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms