RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 IGLON5A6NGN9 336 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 SRRM4A7MD48 611 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 TMCO5BA8MYB1 307 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 FBP2O00757 339 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 TTI1O43156 1089 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 SYT7O43581 403 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 TGDSO95455 350 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ODC1P11926 461 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 SERPINB6P35237 376 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 KHKP50053 298 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 PRELPP51888 382 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 SNU13P55769 128 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 RPS27AP62979 156 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ITPK1Q13572 414 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 TEX35Q5T0J7 233 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 NEPROQ6NW34 567 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ANKRD23Q86SG2 305 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 CACUL1Q86Y37 369 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 THEM5Q8N1Q8 247 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC39A11Q8N1S5 342 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 FIBINQ8TAL6 211 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 GANCQ8TET4 914 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ULK4Q96C45 1275 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 PANX3Q96QZ0 392 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ERGIC2Q96RQ1 377 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 RBM24Q9BX46 236 aaKnown RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 NMUR1Q9HB89 426 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 RARRES3Q9UL19 164 aa3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 ZFP37Q9Y6Q3 630 aaPredicted RBP3.61□□□□□ -1.83
SMCHD1-204ENST00000581226 LOC390937A0A1W2PQ73 354 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 OR5H15A6NDH6 313 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC7A4O43246 635 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 TXNL1O43396 289 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 HPP00738 406 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 GSTA2P09210 222 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 CPA3P15088 417 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 EZRP15311 586 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC1A4P43007 532 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 FHITP49789 147 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 LIMK2P53671 638 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 ASIC1P78348 528 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 AGAP7PQ5VUJ5 663 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 SNRNP48Q6IEG0 339 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF730Q6ZMV8 503 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 CYP4V2Q6ZWL3 525 aaPredicted RBP3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 TMUB2Q71RG4 321 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 PIWIL3Q7Z3Z3 882 aaKnown RBP3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 ASPGQ86U10 573 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 CARNMT1Q8N4J0 409 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 CSNK1G2-AS1Q8NCQ2 148 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 OR1B1Q8NGR6 318 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 OR4Q3Q8NH05 313 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 SPATA18Q8TC71 538 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 GGHQ92820 318 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 RCHY1Q96PM5 261 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 ACPTQ9BZG2 426 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 MIS18AQ9NYP9 233 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 PLEK2Q9NYT0 353 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 LIPT1Q9Y234 373 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 UMODL1Q5DID0 1318 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 SALL1Q9NSC2 1324 aa3.6□□□□□ -1.83
SMCHD1-204ENST00000581226 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 NEDD8-MDP1E9PL57 170 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CCSO14618 274 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CHUKO15111 745 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SRSF10O75494 262 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 OR6B1O95007 311 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC1A6P48664 564 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 GSK3BP49841 420 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CSRP3P50461 194 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 FASTKQ14296 549 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 RPS6KA1Q15418 735 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SPHARQ15513 63 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 TMEM44Q2T9K0 475 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 C15orf32Q32M92 178 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 POM121L1PQ3SYA9 428 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SLC25A30Q5SVS4 291 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 EMBQ6PCB8 327 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 REG3GQ6UW15 175 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CEACAM19Q7Z692 300 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SPAG16Q8N0X2 631 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 SPEM1Q8N4L4 309 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 TMCO5AQ8N6Q1 288 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CCDC197Q8NCU1 140 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 PRCCQ92733 491 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 ATP6V1E2Q96A05 226 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 NAPBQ9H115 298 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 MMADHCQ9H3L0 296 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 FAM212BQ9NTI7 297 aaPredicted RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 CNIH4Q9P003 139 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 PSORS1C1Q9UIG5 152 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 TSPAN16Q9UKR8 245 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 ZNF346Q9UL40 294 aaKnown RBP3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 MGAT4AQ9UM21 535 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 OR1A2Q9Y585 309 aa3.59□□□□□ -1.83
SMCHD1-204ENST00000581226 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
SMCHD1-204ENST00000581226 IGHV3-16A0A0C4DH30 117 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms