RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 HBQ1P09105 142 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 DDCP20711 480 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 TACR1P25103 407 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 ETV5P41161 510 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 CPA2P48052 419 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 GABRA4P48169 554 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 RAB15P59190 212 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 MC2RQ01718 297 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 ACTN3Q08043 901 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 REP15Q6BDI9 236 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 ARPINQ7Z6K5 226 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 RIMKLAQ8IXN7 391 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 TM4SF18Q96CE8 201 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 RCN3Q96D15 328 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 EGLN2Q96KS0 407 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 TEFMQ96QE5 360 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 CTRCQ99895 268 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 HOPXQ9BPY8 73 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 MACROD1Q9BQ69 325 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 DUSP26Q9BV47 211 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 ZNF717Q9BY31 904 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 LRMDAQ9H2I8 198 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 ACTL8Q9H568 366 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 SRPK3Q9UPE1 567 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 AP3M1Q9Y2T2 418 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 PCDHGA8Q9Y5G5 932 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 EPG5Q9HCE0 2579 aa13.19□□□□□ -0.3
CSNK1D-209ENST00000578904 KIF26BQ2KJY2 2108 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 A0A0G2JN53 185 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 HCRTR1O43613 425 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 ANP32DO95626 131 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 STATHP02808 62 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 IL3P08700 152 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 FURINP09958 794 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 IL12AP29459 219 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 ALDH9A1P49189 494 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 NCALDP61601 193 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 NFYCQ13952 458 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 DEFB134Q4QY38 66 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 TIGD2Q4W5G0 525 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 MRM1Q6IN84 353 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 PPP1R3BQ86XI6 285 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 PGAM4Q8N0Y7 254 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 DPP10Q8N608 796 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 KRTCAP2Q8N6L1 136 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 EFCAB3Q8N7B9 438 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 ZFP28Q8NHY6 868 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 GFM2Q969S9 779 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 ZNF501Q96CX3 271 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 COQ8BQ96D53 544 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 NXPE2Q96DL1 559 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 TEX37Q96LM6 180 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 SH3GL1Q99961 368 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 APMAPQ9HDC9 416 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 LHX9Q9NQ69 397 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 FBXO8Q9NRD0 319 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 CROTQ9UKG9 612 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 MRPS33Q9Y291 106 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 NEUROG3Q9Y4Z2 214 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 SCN2AQ99250 2005 aa13.18□□□□□ -0.3
CSNK1D-209ENST00000578904 PRSS51A0A1B0GVH4 220 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 H0YIG0 161 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 RNASET2O00584 256 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TMPRSS11DO60235 418 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 GALR3O60755 368 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 ERN1O75460 977 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 KLHL18O94889 574 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TNFSF15O95150 251 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 NSA2O95478 260 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 NR2F6P10588 404 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 FGF5P12034 268 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 CAPN3P20807 821 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 CPN2P22792 545 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 CERS1P27544 350 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 RBMS1P29558 406 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 PPP2R1BP30154 601 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TRPC1P48995 793 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 HNRNPFP52597 415 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 HNRNPH2P55795 449 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 PDE7AQ13946 482 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 IL11RAQ14626 422 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 UGT8Q16880 541 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TRMT5Q32P41 509 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 C6orf10Q5SRN2 563 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 DCAF12Q5T6F0 453 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 NDUFAF5Q5TEU4 345 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 CEACAM20Q6UY09 585 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 ZNF793Q6ZN11 406 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 DSELQ8IZU8 1212 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 TRIML2Q8N7C3 387 aa13.17□□□□□ -0.3
CSNK1D-209ENST00000578904 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms