RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FBXW2Q9UKT8 454 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 MKL2Q9ULH7 1088 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 TMCO1Q9UM00 188 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 MAN2B2Q9Y2E5 1009 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 MAP4K5Q9Y4K4 846 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 CLDN16Q9Y5I7 305 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 SLC22A7Q9Y694 548 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 CPAMD8Q8IZJ3 1885 aa7.45□□□□□ -1.22
CCDC40-215ENST00000576033 CFAP73A6NFT4 308 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 GLOD5A6NK44 160 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 A6NL46 340 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 H0YIG0 161 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 FCHO1O14526 889 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 HNRNPCL1O60812 293 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 SEC24DO94855 1032 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 OTCP00480 354 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 FHP07954 510 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 COX6A1P12074 109 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 CXCR2P25025 360 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ATP5A1P25705 553 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 HMOX2P30519 316 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 BSGP35613 385 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 SSR2P43308 183 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 EMP3P54852 163 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 LIM2P55344 173 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 RAE1P78406 368 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 BTKQ06187 659 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 TBL3Q12788 808 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 LAPTM5Q13571 262 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 HERC3Q15034 1050 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 PCOLCEQ15113 449 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 HIST2H2ACQ16777 129 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 HIST2H2AA3Q6FI13 130 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 TRIM40Q6P9F5 258 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 KIRREL2Q6UWL6 708 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 GPR155Q7Z3F1 870 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 MTDHQ86UE4 582 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 OR4N5Q8IXE1 308 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 KIRREL3Q8IZU9 778 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 TBC1D19Q8N5T2 526 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 EFCAB3Q8N7B9 438 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ACOT4Q8N9L9 421 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 OR11G2Q8NGC1 345 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 METTL6Q8TCB7 284 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 NUDT8Q8WV74 236 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 SELENOMQ8WWX9 145 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 SLC7A6OSQ96CW6 309 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 MVB12AQ96EY5 273 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 APIPQ96GX9 242 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 MAELQ96JY0 434 aaKnown RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 PPP1R36Q96LQ0 422 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 DPH2Q9BQC3 489 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 EBF4Q9BQW3 602 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 GPR87Q9BY21 358 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 NMUR2Q9GZQ4 415 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 LRMDAQ9H2I8 198 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 TUBB1Q9H4B7 451 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ELOVL6Q9H5J4 265 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ZBTB20Q9HC78 741 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF160Q9HCG1 818 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 P4HTMQ9NXG6 502 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 C5AR2Q9P296 337 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 MARCOQ9UEW3 520 aaPredicted RBP7.44□□□□□ -1.22
CCDC40-215ENST00000576033 KCND3Q9UK17 655 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 KCNMB2Q9Y691 235 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 FAM208BQ5VWN6 2430 aa7.44□□□□□ -1.22
CCDC40-215ENST00000576033 A0A0A6YYD5 115 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 A8MUA0 341 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 SLCO1B7G3V0H7 640 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 TXNDC9O14530 226 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 HDAC3O15379 428 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 MAN1A2O60476 641 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 UGDHO60701 494 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CCDC22O60826 627 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 LDB3O75112 727 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ESRRBO95718 433 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 HSPA4LO95757 839 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ALBP02768 609 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 KLK1P06870 262 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 HEXBP07686 556 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 HIST1H1TP22492 207 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 TPP2P29144 1249 aaPredicted RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CD97P48960 835 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 RPL14P50914 215 aaKnown RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 RAP1GDS1P52306 607 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 UCNP55089 124 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 POLE2P56282 527 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 NAA20P61599 178 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 STXBP1P61764 594 aaKnown RBP7.43□□□□□ -1.22
CCDC40-215ENST00000576033 OCA2Q04671 838 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 DUSP2Q05923 314 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 PRSS53Q2L4Q9 553 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 ZNF750Q32MQ0 723 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 CFAP157Q5JU67 520 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 SH2D4BQ5SQS7 431 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 DEPDC1Q5TB30 811 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 METTL21CQ5VZV1 264 aa7.43□□□□□ -1.22
CCDC40-215ENST00000576033 KANK2Q63ZY3 851 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms