RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 PIK3CBP42338 1070 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 SLC6A11P48066 632 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 SEPHS1P49903 392 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 LIM2P55344 173 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 CNTN1Q12860 1018 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 TP53BP2Q13625 1128 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 MED22Q15528 200 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 MLIPQ5VWP3 458 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 SLC9B2Q86UD5 537 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 HORMAD2Q8N7B1 307 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 PLA2G15Q8NCC3 412 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 SLC38A5Q8WUX1 472 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 POF1BQ8WVV4 589 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 Q96MT0 163 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 COL21A1Q96P44 957 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 OR5M11Q96RB7 305 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 NLNQ9BYT8 704 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 NMNAT1Q9HAN9 279 aaPredicted RBP10.7□□□□□ -0.7
RPAIN-212ENST00000573126 TM7SF3Q9NS93 570 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
RPAIN-212ENST00000573126 ZNF229Q9UJW7 825 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 LTBP2Q14767 1821 aa10.7□□□□□ -0.7
RPAIN-212ENST00000573126 TRBV4-1A0A0J9YWV2 114 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 FEZF1A0PJY2 475 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 OTOL1A6NHN0 477 aaPredicted RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 ANKDD1BA6NHY2 528 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 TBX1O43435 398 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 SH3BP5O60239 455 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RPLP0P05388 317 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 ADRB3P13945 408 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CHMP24386 653 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 EIF2DP41214 584 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 LIMS1P48059 325 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RGS6P49758 472 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 PPP5CP53041 499 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 MAPK12P53778 367 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 MANFP55145 182 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CDC42P60953 191 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 C9orf64Q5T6V5 341 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 REEP3Q6NUK4 255 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 C11orf96Q7Z7L8 435 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CLIP4Q8N3C7 705 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 OR2L2Q8NH16 312 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 OTUB2Q96DC9 234 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RSPRY1Q96DX4 576 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 IL4I1Q96RQ9 567 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RSPO3Q9BXY4 272 aaPredicted RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 C11orf16Q9NQ32 467 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 INIPQ9NRY2 104 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CXXC1Q9P0U4 656 aaPredicted RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 IRAK3Q9Y616 596 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CCDC88CQ9P219 2028 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 METTL15A6NJ78 407 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 DSCR3O14972 297 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 SEMA7AO75326 666 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 FGF19O95750 216 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 IGFBP1P08833 259 aaPredicted RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RHCEP18577 417 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CBLP22681 906 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 ITGB7P26010 798 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CNR2P34972 360 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CTNNB1P35222 781 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 EIF2B2P49770 351 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 TUBA1BP68363 451 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 DOC2BQ14184 412 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 ELOAQ14241 798 aaKnown RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 C1orf53Q5VUE5 145 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 PTCHD4Q6ZW05 846 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 USP43Q70EL4 1123 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 TUBA1AQ71U36 451 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 SZRD1Q7Z422 152 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 FAM129CQ86XR2 697 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 CACTIN-AS1Q8N1I8 211 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 KIAA1958Q8N8K9 716 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 ANKRD53Q8N9V6 530 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 HCAR2Q8TDS4 363 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 TFGQ92734 400 aaPredicted RBP10.69□□□□□ -0.7
RPAIN-212ENST00000573126 HTRA1Q92743 480 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 FAM210AQ96ND0 272 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 OR52A5Q9H2C5 316 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 DPEP2Q9H4A9 486 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 SLC23A2Q9UGH3 650 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 SNX11Q9Y5W9 270 aa10.69□□□□□ -0.7
RPAIN-212ENST00000573126 A0A0G2JN53 185 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 C5orf58C9J3I9 102 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 EFCAB14O75071 495 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 DNTTP04053 509 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 MAGP20916 626 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 UQCRC2P22695 453 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 HMGA2P52926 109 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 RBM45Q8IUH3 476 aaKnown RBP10.68□□□□□ -0.7
RPAIN-212ENST00000573126 MMAAQ8IVH4 418 aaKnown RBP10.68□□□□□ -0.7
RPAIN-212ENST00000573126 KRT78Q8N1N4 520 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 AMER2Q8N7J2 671 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
RPAIN-212ENST00000573126 RAD51AP1Q96B01 352 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 MTERF3Q96E29 417 aa10.68□□□□□ -0.7
RPAIN-212ENST00000573126 TMEM19Q96HH6 336 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms