RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SH3GL2Q99962 352 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 TRIM54Q9BYV2 358 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 SLC22A14Q9Y267 594 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 ATG4BQ9Y4P1 393 aa18.35■□□□□ 0.53
CCDC40-206ENST00000572083 SYT5O00445 386 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 KRT14P02533 472 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 P04436 131 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 GABRA1P14867 456 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 TACR1P25103 407 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 MAGEA3P43357 314 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 ASCL1P50553 236 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 IL2P60568 153 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 STXBP1P61764 594 aaKnown RBP18.34■□□□□ 0.53
CCDC40-206ENST00000572083 SEM1Q6ZVN7 128 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 ZNF595Q8IYB9 648 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 NAXEQ8NCW5 288 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 MCUQ8NE86 351 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 FAM222BQ8WU58 562 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 OR8D2Q9GZM6 311 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 IKZF3Q9UKT9 509 aa18.34■□□□□ 0.53
CCDC40-206ENST00000572083 MRPS33Q9Y291 106 aaKnown RBP18.34■□□□□ 0.53
CCDC40-206ENST00000572083 HCN1O60741 890 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 PIGAP37287 484 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 RNF4P78317 190 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 HYAL4Q2M3T9 481 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 TMEM198Q66K66 360 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 CLEC9AQ6UXN8 241 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 KLHDC8AQ8IYD2 350 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 ULK2Q8IYT8 1036 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 PTPMT1Q8WUK0 201 aaPredicted RBP18.33■□□□□ 0.52
CCDC40-206ENST00000572083 DAZLQ92904 295 aaKnown RBP18.33■□□□□ 0.52
CCDC40-206ENST00000572083 MS4A6EQ96DS6 147 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 SIGLEC10Q96LC7 697 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 NPLQ9BXD5 320 aaPredicted RBP18.33■□□□□ 0.52
CCDC40-206ENST00000572083 SLC17A6Q9P2U8 582 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 NCKAP5O14513 1909 aa18.33■□□□□ 0.52
CCDC40-206ENST00000572083 HSPB2A8KAH6 182 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 KDM4EB2RXH2 506 aaPredicted RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 DVL2O14641 736 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 B3GALT2O43825 422 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 ENO2P09104 434 aaPredicted RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 INHBBP09529 407 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 PLA2G16P53816 162 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 WNT3P56703 355 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 CRYMQ14894 314 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 HSPB2Q16082 182 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 BBS9Q3SYG4 887 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 TTC27Q6P3X3 843 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 OPN5Q6U736 354 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 SBSNQ6UWP8 590 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 MORN4Q8NDC4 146 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 OR14A16Q8NHC5 309 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 RNASE6Q93091 150 aaKnown RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 CAPZA3Q96KX2 299 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 SGCZQ96LD1 299 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 SLC6A15Q9H2J7 730 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 ZNF703Q9H7S9 590 aaPredicted RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 KCNE2Q9Y6J6 123 aa18.32■□□□□ 0.52
CCDC40-206ENST00000572083 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 FN1P02751 2386 aaKnown RBP18.32■□□□□ 0.52
CCDC40-206ENST00000572083 LRIT2A6NDA9 550 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 AHSGP02765 367 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 CCDC175P0C221 793 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 RFPL3SP0C7P2 107 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 CERS1P27544 350 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 HOXC12P31275 282 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 CXCR5P32302 372 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 LIM2P55344 173 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 PPP1R3AQ16821 1122 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 PRAMEF20Q5VT98 475 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 FBXW8Q8N3Y1 598 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 GPATCH11Q8N954 259 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 TNIP2Q8NFZ5 429 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 SLC2A12Q8TD20 617 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 LRRC46Q96FV0 321 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 QRFPRQ96P65 431 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 ALOXE3Q9BYJ1 711 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 HOMER3Q9NSC5 361 aa18.31■□□□□ 0.52
CCDC40-206ENST00000572083 A0A088AWK7 358 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 C17orf105B2RV13 164 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 CYR61O00622 381 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 ZNF10P21506 573 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-206ENST00000572083 TRPC1P48995 793 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 KCNJ2P63252 427 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 ASPHQ12797 758 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 STX4Q12846 297 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 SLBPQ14493 270 aaKnown RBP eCLIP18.3■□□□□ 0.52
CCDC40-206ENST00000572083 DAZAP2Q15038 168 aaPredicted RBP18.3■□□□□ 0.52
CCDC40-206ENST00000572083 ADGRD1Q6QNK2 874 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 CHSY3Q70JA7 882 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 KRTAP1-3Q8IUG1 177 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 OR8K3Q8NH51 312 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 RUNDC3BQ96NL0 473 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 VTI1BQ9UEU0 232 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 DAPP1Q9UN19 280 aa18.3■□□□□ 0.52
CCDC40-206ENST00000572083 JMJD1CQ15652 2540 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 LDB3O75112 727 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 BANF1O75531 89 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 PGAM1P18669 254 aa18.29■□□□□ 0.52
CCDC40-206ENST00000572083 TNNI3P19429 210 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms