RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	TRIM33	Q9UPN9	1127 aa		11.33	□□□□□ -0.6
FANCA-231	ENST00000568626	MMACHC	Q9Y4U1	282 aa		11.33	□□□□□ -0.6
FANCA-231	ENST00000568626	ASB4	Q9Y574	426 aa		11.33	□□□□□ -0.6
FANCA-231	ENST00000568626	PCDHGA6	Q9Y5G7	932 aa		11.33	□□□□□ -0.6
FANCA-231	ENST00000568626	SEC16A	O15027	2179 aa		11.33	□□□□□ -0.6
FANCA-231	ENST00000568626	SCN3A	Q9NY46	2000 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GOLGA8Q	A0A0J9YX86	632 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	C1orf226	A1L170	272 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GOLGA8O	A6NCC3	632 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	C1QTNF9B	B2RNN3	333 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GOLGA8N	F8WBI6	632 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	CLDN4	O14493	209 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	PRMT3	O60678	531 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	BMP10	O95393	424 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	IGHE	P01854	428 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GBA	P04062	536 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	ZGLP1	P0C6A0	271 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	C1QTNF9	P0C862	333 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	BCKDHA	P12694	445 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	DRD2	P14416	443 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	IDO1	P14902	403 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	SDC1	P18827	310 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	TCN2	P20062	427 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	DLST	P36957	453 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	RPL3	P39023	403 aa	Known RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	ARFIP2	P53365	341 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	HNRNPH2	P55795	449 aa	Known RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	HSD17B7	P56937	341 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	KLC1	Q07866	573 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GSTA3	Q16772	222 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	SYT16	Q17RD7	645 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	LSM12	Q3MHD2	195 aa	Known RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	IL23R	Q5VWK5	629 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	MLIP	Q5VWP3	458 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	CGB2	Q6NT52	195 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	QSOX2	Q6ZRP7	698 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	CPLX4	Q7Z7G2	160 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	TMEM132C	Q8N3T6	1108 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	ENDOV	Q8N8Q3	282 aa	Known RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	OR2Y1	Q8NGV0	311 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	C16orf78	Q8WTQ4	265 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	KCNE4	Q8WWG9	221 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	RNF31	Q96EP0	1072 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	ZNF764	Q96H86	408 aa	Predicted RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	OR52B2	Q96RD2	323 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	SPSB2	Q99619	263 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	MAPKAP1	Q9BPZ7	522 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	C1orf50	Q9BV19	199 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	DPH1	Q9BZG8	443 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	EPN3	Q9H201	632 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	AIG1	Q9NVV5	245 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	EHD3	Q9NZN3	535 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	GIMAP2	Q9UG22	337 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	CROT	Q9UKG9	612 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	FBXW2	Q9UKT8	454 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	DLGAP4	Q9Y2H0	992 aa		11.32	□□□□□ -0.6
FANCA-231	ENST00000568626	AKAP13	Q12802	2813 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CACNA1G	O43497	2377 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TMEM8B	A6NDV4	472 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CYR61	O00622	381 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TERT	O14746	1132 aa	Known RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PROM1	O43490	865 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	AIFM1	O95831	613 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	IL3	P08700	152 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PRPS1L1	P21108	318 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PTPN4	P29074	926 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	HPCAL1	P37235	193 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	FOLR3	P41439	243 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	SEC24C	P53992	1094 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	C21orf58	P58505	322 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TAS2R50	P59544	299 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CLN3	Q13286	438 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	MINDY4	Q4G0A6	757 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	NDUFAF5	Q5TEU4	345 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	METTL21C	Q5VZV1	264 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	LCN10	Q6JVE6	187 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	SPATA21	Q7Z572	469 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	LIX1	Q8N485	282 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	FAM47B	Q8NA70	645 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	RFWD2	Q8NHY2	731 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CDC26	Q8NHZ8	85 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TANK	Q92844	425 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	NACC2	Q96BF6	587 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TM4SF18	Q96CE8	201 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	MTERF3	Q96E29	417 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	VPS50	Q96JG6	964 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CSF3R	Q99062	836 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	EBF4	Q9BQW3	602 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	CRB3	Q9BUF7	120 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TMEM120A	Q9BXJ8	343 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	RPF2	Q9H7B2	306 aa	Known RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	PRTFDC1	Q9NRG1	225 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	LANCL2	Q9NS86	450 aa		11.31	□□□□□ -0.6
FANCA-231	ENST00000568626	SEMA3G	Q9NS98	782 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms