RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 EPYCQ99645 322 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 TAS2R7Q9NYW3 318 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 ANGPT4Q9Y264 503 aa17.24■□□□□ 0.35
SMPD3-211ENST00000568373 MDC1Q14676 2089 aaKnown RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 M0QX08 132 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 B4GAT1O43505 415 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 C9P02748 559 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 CHRM5P08912 532 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 DRD2P14416 443 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 GABRG2P18507 467 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 HSPB3Q12988 150 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 FBXO43Q4G163 708 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 IFI44LQ53G44 452 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 NDUFAF5Q5TEU4 345 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 KIAA1614Q5VZ46 1190 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 GPR141Q7Z602 305 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 TSEN54Q7Z6J9 526 aaKnown RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 CHDHQ8NE62 594 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 OR4E2Q8NGC2 313 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 CCL4L1Q8NHW4 92 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 ZFAND2BQ8WV99 257 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 MS4A6EQ96DS6 147 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 NPLQ9BXD5 320 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 RUBCNLQ9H714 662 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 ACSS1Q9NUB1 689 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 NDUFAF4Q9P032 175 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF624Q9P2J8 865 aaPredicted RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 RSL24D1Q9UHA3 163 aaKnown RBP17.23■□□□□ 0.35
SMPD3-211ENST00000568373 MMP17Q9ULZ9 603 aa17.23■□□□□ 0.35
SMPD3-211ENST00000568373 H3BQ06 376 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 TNFRSF10CO14798 259 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 BCKDKO14874 412 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 IFNA14P01570 189 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 STATHP02808 62 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 IL7RP16871 459 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CRHBPP24387 322 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ACTR1BP42025 376 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 SH3BGRP55822 239 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ACTR1AP61163 376 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ISL1P61371 349 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 TFF2Q03403 129 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CD47Q08722 323 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 LSAMPQ13449 338 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CCINQ13939 588 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ZBED5Q49AG3 693 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF425Q6IV72 752 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF773Q6PK81 442 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CEACAM20Q6UY09 585 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 MACROD1Q9BQ69 325 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 TMEM168Q9H0V1 697 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 SLC24A3Q9HC58 644 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 SIRT3Q9NTG7 399 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 EHD3Q9NZN3 535 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 PNMA8BQ9ULN7 279 aaPredicted RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 PCDHGB3Q9Y5G1 929 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 PCDHGA4Q9Y5G9 962 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ISM1B1AKI9 464 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ERI3O43414 337 aaKnown RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 JRKO75564 520 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 RRM2P31350 389 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 RYKP34925 604 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CDK9P50750 372 aaKnown RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 MLC1Q15049 377 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 MEP1AQ16819 746 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 CTU2Q2VPK5 515 aaKnown RBP17.22■□□□□ 0.35
SMPD3-211ENST00000568373 LRIT3Q3SXY7 679 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 C6orf141Q5SZD1 244 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ALDH16A1Q8IZ83 802 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 PSMA8Q8TAA3 256 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 UCN3Q969E3 161 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 KCNC2Q96PR1 638 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 FAIM2Q9BWQ8 316 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 ADNPQ9H2P0 1102 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 VCX3AQ9NNX9 186 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 KIF17Q9P2E2 1029 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 KLF15Q9UIH9 416 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 SNX7Q9UNH6 387 aa17.22■□□□□ 0.35
SMPD3-211ENST00000568373 C4orf51C9J302 202 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 UGT2B11O75310 529 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 RASGRP1O95267 797 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 TNFRSF1BP20333 461 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 HIST1H1TP22492 207 aaPredicted RBP17.21■□□□□ 0.35
SMPD3-211ENST00000568373 EEF1B2P24534 225 aaKnown RBP17.21■□□□□ 0.35
SMPD3-211ENST00000568373 AKT2P31751 481 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 ARFIP1P53367 373 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 RPS26P62854 115 aaKnown RBP17.21■□□□□ 0.35
SMPD3-211ENST00000568373 SLC9A5Q14940 896 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 SPDYE7PQ495Y7 208 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 FAHD1Q6P587 224 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 ABHD17CQ6PCB6 329 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 KCTD8Q6ZWB6 473 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 HORMAD2Q8N7B1 307 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 MFSD9Q8NBP5 474 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 OR2L5Q8NG80 312 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 ZNF347Q96SE7 839 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 RIBC2Q9H4K1 309 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 PRDM7Q9NQW5 492 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 THSD1Q9NS62 852 aa17.21■□□□□ 0.35
SMPD3-211ENST00000568373 KLHL20Q9Y2M5 609 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms