RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 CUL3Q13618 768 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 ELAVL1Q15717 326 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 FAM153CQ494X1 144 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 ZNF766Q5HY98 468 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 C10orf62Q5T681 223 aaPredicted RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 TMEM151AQ8N4L1 468 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 KIF2BQ8N4N8 673 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 HORMAD2Q8N7B1 307 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 PTGR2Q8N8N7 351 aaPredicted RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 FAM47BQ8NA70 645 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 WDR20Q8TBZ3 569 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 SSC4DQ8WTU2 575 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 NR4A3Q92570 626 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 PHF21BQ96EK2 531 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 SCYL1Q96KG9 808 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 MTERF1Q99551 399 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 MAPKAP1Q9BPZ7 522 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 RHOXF2Q9BQY4 288 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 DEFB126Q9BYW3 111 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 MRPL46Q9H2W6 279 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 OR51B5Q9H339 312 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 CDCP1Q9H5V8 836 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 L2HGDHQ9H9P8 463 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 DMRT3Q9NQL9 472 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 PNO1Q9NRX1 252 aaKnown RBP11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 XPR1Q9UBH6 696 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 PCTPQ9UKL6 214 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 RNF11Q9Y3C5 154 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 SPACA6W5XKT8 324 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 ITPR2Q14571 2701 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
LPCAT4-206ENST00000566581 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 GABRR3A8MPY1 467 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 A8MUA0 341 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 RTCAO00442 366 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 OR7A17O14581 309 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 MAN1A2O60476 641 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SBK3P0C264 359 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 TRHRP34981 398 aaPredicted RBP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SSR2P43308 183 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 MLF1P58340 268 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 PHEXP78562 749 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SERTAD2Q14140 314 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SLC29A2Q14542 456 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 OR1C1Q15619 314 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 CPSF6Q16630 551 aaKnown RBP eCLIP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 MYLK4Q86YV6 388 aaPredicted RBP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 TMEM132CQ8N3T6 1108 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 ZCCHC7Q8N3Z6 543 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 ACMSDQ8TDX5 336 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 VMP1Q96GC9 406 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SCMH1Q96GD3 660 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SIGLEC12Q96PQ1 595 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 CSF3RQ99062 836 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 C1QTNF3Q9BXJ4 246 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 ALOXE3Q9BYJ1 711 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 NOL11Q9H8H0 719 aaKnown RBP11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 ZBTB26Q9HCK0 441 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 CLCA3PQ9Y6N3 262 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
LPCAT4-206ENST00000566581 SAP18O00422 153 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 PLPP1O14494 284 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 FCHO1O14526 889 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 SH3BGRLO75368 114 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 NEURL1O76050 574 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 CD46P15529 392 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 TPP2P29144 1249 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 PPP2R1BP30154 601 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 CYB561P49447 251 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 CCNG1P51959 295 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 RAP1GDS1P52306 607 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 RPS13P62277 151 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 IGLV3-21P80748 117 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 STX4Q12846 297 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 SLAMF1Q13291 335 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 ZRSR2Q15696 482 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 GGTA1PQ4G0N0 100 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 SPINK14Q6IE38 97 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 MRM1Q6IN84 353 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 GPR180Q86V85 440 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 RNF175Q8N4F7 328 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 TMEM178AQ8NBL3 297 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 MORN4Q8NDC4 146 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 MYRIPQ8NFW9 859 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 OR52B6Q8NGF0 335 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 PTPMT1Q8WUK0 201 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 TANKQ92844 425 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 DAZLQ92904 295 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 ATP6V1E2Q96A05 226 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 ANKRD9Q96BM1 317 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 CCDC77Q9BR77 488 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 ZNF717Q9BY31 904 aaPredicted RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 EPB41L4BQ9H329 900 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 DDX31Q9H8H2 851 aaKnown RBP11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 LRFN1Q9P244 771 aa11.79□□□□□ -0.52
LPCAT4-206ENST00000566581 PHF11Q9UIL8 331 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms