RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SEC22BO75396 215 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 CDC123O75794 336 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 FHP07954 510 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 VIMP08670 466 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 FAM58BPP0C7Q3 252 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 NR2F6P10588 404 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 LIFP15018 202 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 IL10P22301 178 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 JAK1P23458 1154 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 BUD31P41223 144 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 FOLR3P41439 243 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 GYS2P54840 703 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 FOXL2P58012 376 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 RPS18P62269 152 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 RPS15P62841 145 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 RAE1P78406 368 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 TNFRSF17Q02223 184 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 SLAMF1Q13291 335 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 NKG7Q16617 165 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 MINDY4Q4G0A6 757 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 VWA2Q5GFL6 755 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 VWA5B1Q5TIE3 1220 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 GALNT18Q6P9A2 607 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 SHISA6Q6ZSJ9 500 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 SHISA5Q8N114 240 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 FNDC5Q8NAU1 212 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 CDC26Q8NHZ8 85 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 STT3BQ8TCJ2 826 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 TBC1D20Q96BZ9 403 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 MIEF2Q96C03 454 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 C11orf24Q96F05 449 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 METTL2AQ96IZ6 378 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 MAPKAP1Q9BPZ7 522 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 EFHD1Q9BUP0 239 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 C1orf50Q9BV19 199 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 GPR87Q9BY21 358 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 ACTL8Q9H568 366 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 SOX17Q9H6I2 414 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 TEX10Q9NXF1 929 aaPredicted RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 KCND3Q9UK17 655 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 MRPS33Q9Y291 106 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 TMED5Q9Y3A6 229 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 PTRH2Q9Y3E5 179 aaKnown RBP10.82□□□□□ -0.68
KARS-207ENST00000566560 ACACBO00763 2458 aa10.82□□□□□ -0.68
KARS-207ENST00000566560 URB1O60287 2271 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 GOLGA8QA0A0J9YX86 632 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 GOLGA8OA6NCC3 632 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 VSTM2BA6NLU5 285 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 GOLGA8NF8WBI6 632 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 SDHDO14521 159 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 RRP8O43159 456 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 DIAPH2O60879 1101 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 PEX11AO75192 247 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 VPS4BO75351 444 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 JRKO75564 520 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 BMP10O95393 424 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 AIFM1O95831 613 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 AVPP01185 164 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 CD63P08962 238 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 ANXA4P09525 319 aaPredicted RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 ZGLP1P0C6A0 271 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 ALOX15P16050 662 aaPredicted RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 CPN2P22792 545 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 F8A1P23610 371 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 MAPK1P28482 360 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 PTPN4P29074 926 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 EPHA3P29320 983 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 FOXK2Q01167 660 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 KLC1Q07866 573 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 ZNF763Q0D2J5 394 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 SRSF6Q13247 344 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 FAM69BQ5VUD6 431 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 MRM1Q6IN84 353 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 NOXRED1Q6NXP6 359 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 GPR180Q86V85 440 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 PROSER1Q86XN7 944 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 OR2Y1Q8NGV0 311 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 STARD8Q92502 1023 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 FCRL1Q96LA6 429 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 CRB3Q9BUF7 120 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 DPH1Q9BZG8 443 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 TGIF2Q9GZN2 237 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 NPHS2Q9NP85 383 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 SIRT5Q9NXA8 310 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 MS4A12Q9NXJ0 267 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 FAM53CQ9NYF3 392 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 IL17BQ9UHF5 180 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 TCFL5Q9UL49 500 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 FARSAQ9Y285 508 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 ATG4BQ9Y4P1 393 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 PCDHGA6Q9Y5G7 932 aa10.81□□□□□ -0.68
KARS-207ENST00000566560 MRPS18BQ9Y676 258 aaKnown RBP10.81□□□□□ -0.68
KARS-207ENST00000566560 WDFY3Q8IZQ1 3526 aa10.8□□□□□ -0.68
KARS-207ENST00000566560 IDSB3KWA1 339 aa10.8□□□□□ -0.68
KARS-207ENST00000566560 ZNF195O14628 629 aa10.8□□□□□ -0.68
KARS-207ENST00000566560 B4GALT2O60909 372 aa10.8□□□□□ -0.68
KARS-207ENST00000566560 GUCY1B2O75343 617 aa10.8□□□□□ -0.68
KARS-207ENST00000566560 PRKRAO75569 313 aaKnown RBP10.8□□□□□ -0.68
KARS-207ENST00000566560 KLF7O75840 302 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms