RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TRIM64BA6NI03 449 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 WBP4O75554 376 aaKnown RBP17.81■□□□□ 0.44
MSLN-207ENST00000566549 TRIM23P36406 574 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 IDH2P48735 452 aaKnown RBP17.81■□□□□ 0.44
MSLN-207ENST00000566549 CSNK1G2P78368 415 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 ANKDD1AQ495B1 522 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 SYCE2Q6PIF2 218 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 NUDT13Q86X67 352 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 FAM81AQ8TBF8 368 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 APH1BQ8WW43 257 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 RORBQ92753 470 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 ACSL5Q9ULC5 683 aa17.81■□□□□ 0.44
MSLN-207ENST00000566549 GLOD5A6NK44 160 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 M0R129 80 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 BCAS1O75363 584 aaPredicted RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 SEMA3DO95025 777 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 JUNDP17535 347 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 PSMB9P28065 219 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 ALDH4A1P30038 563 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 HSD17B2P37059 387 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 SLC19A1P41440 591 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 MASP1P48740 699 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 DGKEP52429 567 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 COL9A2Q14055 689 aaPredicted RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 UBE3DQ7Z6J8 389 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 GTPBP3Q969Y2 492 aaKnown RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 CAMK1GQ96NX5 476 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 NKX2-4Q9H2Z4 354 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 RAD21L1Q9H4I0 556 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 DUSP21Q9H596 190 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 EPS8L2Q9H6S3 715 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 ICKQ9UPZ9 632 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 RNF6Q9Y252 685 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 HSPE1-MOB4S4R3N1 261 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 KIF26AQ9ULI4 1882 aaPredicted RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 MYO9BQ13459 2157 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 C5orf58C9J3I9 102 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 PCDH17O14917 1159 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 SLC31A1O15431 190 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 B4GALT2O60909 372 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 RPS6KA3P51812 740 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 PCBP3P57721 371 aaKnown RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 TP53BP2Q13625 1128 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 ITPRIPL2Q3MIP1 535 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 CRB2Q5IJ48 1285 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 KLHL35Q6PF15 583 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 CCDC80Q76M96 950 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 GEMIN6Q8WXD5 167 aaKnown RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 EZH1Q92800 747 aaPredicted RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 DNASE1L2Q92874 299 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 OTUB1Q96FW1 271 aaPredicted RBP17.8■□□□□ 0.44
MSLN-207ENST00000566549 ZNF347Q96SE7 839 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 PCBD2Q9H0N5 130 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 PRDM8Q9NQV8 689 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 SPATA7Q9P0W8 599 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 KLHL20Q9Y2M5 609 aa17.8■□□□□ 0.44
MSLN-207ENST00000566549 A0A0J9YVX5 310 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 FAM227AF5H4B4 570 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 RGS10O43665 173 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 DPM1O60762 260 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 CEACAM5P06731 702 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 SSR2P43308 183 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 MLLT10P55197 1068 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 TMED1Q13445 227 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 MICAQ29983 383 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 ZNF776Q68DI1 518 aaPredicted RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 OR4C15Q8NGM1 316 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 UTP15Q8TED0 518 aaKnown RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 SLC38A5Q8WUX1 472 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 RGMAQ96B86 450 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 TEFMQ96QE5 360 aaKnown RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 PITX2Q99697 317 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 GABARAPL3Q9BY60 117 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 KLHL31Q9H511 634 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 GPN2Q9H9Y4 310 aaPredicted RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 PLGRKTQ9HBL7 147 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 DZANK1Q9NVP4 752 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 ENPP5Q9UJA9 477 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 DNMT3AQ9Y6K1 912 aaPredicted RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 AP1M2Q9Y6Q5 423 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 PLXND1Q9Y4D7 1925 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 RAB28P51157 221 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 PROX2Q3B8N5 592 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 PPP2R2DQ66LE6 453 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 REEP3Q6NUK4 255 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 NUDT18Q6ZVK8 323 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 C6orf120Q7Z4R8 191 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 P3H2Q8IVL5 708 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 RAB42Q8N4Z0 105 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 OR2A1Q8NGT9 310 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 OR5P2Q8WZ92 322 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 TMEM19Q96HH6 336 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 HRASLS5Q96KN8 279 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 SLC17A9Q9BYT1 436 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 AICDAQ9GZX7 198 aa17.79■□□□□ 0.44
MSLN-207ENST00000566549 FAM32AQ9Y421 112 aaKnown RBP17.79■□□□□ 0.44
MSLN-207ENST00000566549 GOLGA4Q13439 2230 aaKnown RBP17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3DA0A087WVF3 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3IA0A087WXS9 549 aa17.78■□□□□ 0.44
MSLN-207ENST00000566549 TBC1D3EA0A087X179 549 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms