RNA–Protein interactions for RNA: ENST00000565121.1

NEIL1-209, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 1,169 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-209ENST00000565121 IRF9Q00978 393 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 BMPR2Q13873 1038 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 E2F2Q14209 437 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 SLMAPQ14BN4 828 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 EMC4Q5J8M3 183 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 CCDC71Q8IV32 467 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-209ENST00000565121 CYP4Z2PQ8N1L4 340 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 ARMC10Q8N2F6 343 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 TMEM156Q8N614 296 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 TMEM52Q8NDY8 209 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 STAG3L4Q8TBR4 150 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 KCTD4Q8WVF5 259 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 MS4A6EQ96DS6 147 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 MRRFQ96E11 262 aaKnown RBP12.34□□□□□ -0.43
NEIL1-209ENST00000565121 QRFPRQ96P65 431 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 GPR78Q96P69 363 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 TREX2Q9BQ50 279 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-209ENST00000565121 CAPS2Q9BXY5 557 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 EHD1Q9H4M9 534 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-209ENST00000565121 DEPPQ9NTK1 212 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 WWOXQ9NZC7 414 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 COQ3Q9NZJ6 369 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 CD274Q9NZQ7 290 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 RNF6Q9Y252 685 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 KLF13Q9Y2Y9 288 aaPredicted RBP12.34□□□□□ -0.43
NEIL1-209ENST00000565121 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 EML6Q6ZMW3 1958 aa12.34□□□□□ -0.43
NEIL1-209ENST00000565121 SPG11Q96JI7 2443 aa12.33□□□□□ -0.43
NEIL1-209ENST00000565121 KLRC4-KLRK1H3BQV0 150 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 UBXN8O00124 270 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 ITGA10O75578 1167 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 CLEC3AO75596 197 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 ALDOAP04075 364 aaKnown RBP12.33□□□□□ -0.44
NEIL1-209ENST00000565121 LTA4HP09960 611 aaKnown RBP12.33□□□□□ -0.44
NEIL1-209ENST00000565121 CASP2P42575 452 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 CLCN2P51788 898 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 SKP1P63208 163 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 RAPH1Q70E73 1250 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 UBE3DQ7Z6J8 389 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 POGLUT1Q8NBL1 392 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 B3GNT7Q8NFL0 401 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 NCLNQ969V3 563 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 ACSS3Q9H6R3 686 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 CNOT10Q9H9A5 744 aaKnown RBP12.33□□□□□ -0.44
NEIL1-209ENST00000565121 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 KCMF1Q9P0J7 381 aa12.33□□□□□ -0.44
NEIL1-209ENST00000565121 A0A0G2JMM0 328 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 A0A1W2PPB8 328 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 A0A1W2PRS3 328 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 URADA6NGE7 173 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 TMEM200CA6NKL6 621 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 KIR3DP1A8MWS1 328 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 CCNT2O60583 730 aaKnown RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 KERAO60938 352 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 IGFBP2P18065 325 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 GPR143P51810 404 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 TFF3Q07654 80 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 CHIT1Q13231 466 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 TBCCQ15814 346 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PDK4Q16654 411 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 XKR6Q5GH73 641 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 ABHD17CQ6PCB6 329 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 SPNS3Q6ZMD2 512 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 KRT78Q8N1N4 520 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PLD6Q8N2A8 252 aaKnown RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 SNX31Q8N9S9 440 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 ZFP62Q8NB50 900 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 ARMC2Q8NEN0 867 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 TTLQ8NG68 377 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 LILRB4Q8NHJ6 448 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 IFT81Q8WYA0 676 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 EXT2Q93063 718 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PTCD3Q96EY7 689 aaKnown RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 SEC16BQ96JE7 1060 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 F2RL3Q96RI0 385 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PITHD1Q9GZP4 211 aaPredicted RBP12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PRDM7Q9NQW5 492 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 PRTFDC1Q9NRG1 225 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 SNX15Q9NRS6 342 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 NUDT4Q9NZJ9 180 aa12.32□□□□□ -0.44
NEIL1-209ENST00000565121 A0A096LPK6 155 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 LRRC14BA6NHZ5 514 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 FAM166BA8MTA8 275 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 G3V3Y1 287 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 CYR61O00622 381 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 CLGNO14967 610 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 ERI3O43414 337 aaKnown RBP12.31□□□□□ -0.44
NEIL1-209ENST00000565121 KLK8O60259 260 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 DIAPH2O60879 1101 aa12.31□□□□□ -0.44
NEIL1-209ENST00000565121 TOXO94900 526 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms