RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PDXPQ96GD0 296 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SLC38A2Q96QD8 506 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 MGLLQ99685 303 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 RIOK2Q9BVS4 552 aaKnown RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 BTBD2Q9BX70 525 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 ANKRD19PQ9H560 264 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 ABCB10Q9NRK6 738 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 C1GALT1Q9NS00 363 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TDP1Q9NUW8 608 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 KLHL28Q9NXS3 571 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 SAGE1Q9NXZ1 904 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 NDOR1Q9UHB4 597 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 IFT52Q9Y366 437 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 PCDHGA2Q9Y5H1 932 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 HEMK1Q9Y5R4 338 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-249ENST00000564606 TTC3P53804 2025 aa7.3□□□□□ -1.24
ATXN3-249ENST00000564606 EDDM13A0A1B0GTR0 161 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TTC36A6NLP5 189 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ZAR1LA6NP61 321 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 A8MX80 341 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CENPBD1B2RD01 187 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 FAM25AB3EWG3 89 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 FAM25CB3EWG5 89 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 FAM25GB3EWG6 89 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TEX28O15482 410 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ZW10O43264 779 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 AQP9O43315 295 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TSPAN6O43657 245 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LZTS3O60299 673 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 PQBP1O60828 265 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 FKTNO75072 461 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ZNF821O75541 412 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 WBP4O75554 376 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LEFTY1O75610 366 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SNAPC5O75971 98 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 C6orf47O95873 294 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SLC16A8O95907 504 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LGI1O95970 557 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 IL1AP01583 271 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TFPTP0C1Z6 253 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ADORA3P0DMS8 318 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DBTP11182 482 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TYRP14679 529 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ALOX12P18054 663 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ENDOUP21128 410 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ITGB7P26010 798 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 HLA-FP30511 346 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TGFBR2P37173 567 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 MMP12P39900 470 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SLC15A1P46059 708 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RPS5P46782 204 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 KHKP50053 298 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CCR8P51685 355 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SMSP52788 366 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 MAPK12P53778 367 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CRISP3P54108 245 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 EPHA5P54756 1037 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 PCBP3P57721 371 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 NCS1P62166 190 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LSM3P62310 102 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TBPL1P62380 186 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CYP4F8P98187 520 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SEMG2Q02383 582 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 MLLT11Q13015 90 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 IRF3Q14653 427 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 MED22Q15528 200 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DUSP6Q16828 381 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 EXOC3L2Q2M3D2 409 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ARMC4Q5T2S8 1044 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM164Q5U3C3 297 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LAIR2Q6ISS4 152 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 XKRXQ6PP77 449 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 METAP1DQ6UB28 335 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 Q6ZVU0 165 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TMEM173Q86WV6 379 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 TRAPPC5Q8IUR0 188 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LYSMD2Q8IV50 215 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CLECL1Q8IZS7 167 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 CLDN22Q8N7P3 220 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 GDPD1Q8N9F7 314 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 OR4C15Q8NGM1 316 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 OR2L2Q8NH16 312 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 WDR36Q8NI36 951 aaKnown RBP7.29□□□□□ -1.24
ATXN3-249ENST00000564606 NFKBIDQ8NI38 313 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 GRPEL2Q8TAA5 225 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 WFDC5Q8TCV5 224 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SFXN5Q8TD22 340 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SMPDL3AQ92484 453 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DNASE1L2Q92874 299 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 RGMAQ96B86 450 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 NUS1Q96E22 293 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 DTD2Q96FN9 168 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 LMLNQ96KR4 655 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 EGLN2Q96KS0 407 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 ZNF354BQ96LW1 612 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 WDFY2Q96P53 400 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 KCNC2Q96PR1 638 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 SMIM14Q96QK8 99 aa7.29□□□□□ -1.24
ATXN3-249ENST00000564606 FAM129BQ96TA1 746 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms