RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 RBM18Q96H35 190 aaKnown RBP2.26□□□□□ -2.05
CHD9-209ENST00000564255 C2orf48Q96LS8 159 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 ERGIC2Q96RQ1 377 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 NKX3-1Q99801 234 aaPredicted RBP2.26□□□□□ -2.05
CHD9-209ENST00000564255 MMP28Q9H239 520 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 RWDD1Q9H446 243 aaPredicted RBP2.26□□□□□ -2.05
CHD9-209ENST00000564255 COQ10BQ9H8M1 238 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 HPS4Q9NQG7 708 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 C2orf42Q9NWW7 574 aa2.26□□□□□ -2.05
CHD9-209ENST00000564255 A0A087WZY1 265 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 FAM172BPA6NC97 362 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ADAM12O43184 909 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 CAVIN2O95810 425 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 GPX3P22352 226 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 EDNRAP25101 427 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SLC6A8P48029 635 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 KCNK10P57789 538 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 FUT7Q11130 342 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 AGKQ53H12 422 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SLC22A16Q86VW1 577 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 CERS5Q8N5B7 392 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 LRRC17Q8N6Y2 441 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ADAD2Q8NCV1 583 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 GPRC5AQ8NFJ5 357 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 OR10G8Q8NGN5 311 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SUSD6Q92537 303 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 RAB7BQ96AH8 199 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 VPS39Q96JC1 886 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 CTAGE1Q96RT6 745 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 FICDQ9BVA6 458 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 WWP1Q9H0M0 922 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SLC26A1Q9H2B4 701 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ZNF665Q9H7R5 613 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 EXTL2Q9UBQ6 330 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 COPS7AQ9UBW8 275 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 TBK1Q9UHD2 729 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ERRFI1Q9UJM3 462 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 SELENOKQ9Y6D0 94 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 YJEFN3A6XGL0 299 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SLCO1B7G3V0H7 640 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 BUB3O43684 328 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 LANCL1O43813 399 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ANGPTL1O95841 491 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ATP1A1P05023 1023 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 SNHG28P0DPA3 235 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 HSPA5P11021 654 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 NCF1P14598 390 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 RPL35AP18077 110 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SOX3P41225 446 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 LIMK2P53671 638 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ELP6Q0PNE2 266 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 RIGQ13278 110 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 SNX1Q13596 522 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 EXOSC7Q15024 291 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 C3AR1Q16581 482 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ZNF672Q499Z4 452 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 SPANXN4Q5MJ08 99 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ATP1A1-AS1Q5TC04 95 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 RFPL4BQ6ZWI9 263 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 MCM10Q7L590 875 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 DND1Q8IYX4 353 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 DENND6BQ8NEG7 585 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 OR4D10Q8NGI6 311 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 OR6M1Q8NGM8 313 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 GOLGA5Q8TBA6 731 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 GPR148Q8TDV2 347 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 CHPT1Q8WUD6 406 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 RPGRIP1Q96KN7 1286 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 FAM218AQ96MZ4 157 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 GPA33Q99795 319 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 JPH2Q9BR39 696 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 CRACR2AQ9BSW2 395 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 FUNDC2Q9BWH2 189 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 NT5C3AQ9H0P0 336 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 MTIF3Q9H2K0 278 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 ROPN1Q9HAT0 212 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 ZNF334Q9HCZ1 680 aaPredicted RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 TECRQ9NZ01 308 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 VPS54Q9P1Q0 977 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 ZNF319Q9P2F9 582 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 MRTO4Q9UKD2 239 aaKnown RBP2.25□□□□□ -2.05
CHD9-209ENST00000564255 NISCHQ9Y2I1 1504 aa2.25□□□□□ -2.05
CHD9-209ENST00000564255 BMPR1BO00238 502 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 HIST1H2AGP0C0S8 130 aaPredicted RBP2.24□□□□□ -2.05
CHD9-209ENST00000564255 ZCCHC18P0CG32 403 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 TSPY4P0CV99 314 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 TSPY10P0CW01 314 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 TPBGLP0DKB5 382 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 PRKAR1AP10644 381 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 GP9P14770 177 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 IL4RP24394 825 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 PTPN4P29074 926 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 HSPA1LP34931 641 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 FEN1P39748 380 aaKnown RBP2.24□□□□□ -2.05
CHD9-209ENST00000564255 LEPRP48357 1165 aaKnown RBP2.24□□□□□ -2.05
CHD9-209ENST00000564255 FHITP49789 147 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 ARFIP1P53367 373 aa2.24□□□□□ -2.05
CHD9-209ENST00000564255 TRA2BP62995 288 aaKnown RBP2.24□□□□□ -2.05
CHD9-209ENST00000564255 MYBPC1Q00872 1141 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms