RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 NDRG3Q9UGV2 375 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 MALRD1Q5VYJ5 2156 aa7.07□□□□□ -1.28
HERPUD1-206ENST00000563343 PKD1L1Q8TDX9 2849 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 C15orf38-AP3S2A0A0A6YYH1 394 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 TRBC2A0A5B9 178 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ERI2A8K979 691 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SMTNL1A8MU46 457 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ERN1O75460 977 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SERPINC1P01008 464 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 C1QAP02745 245 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ESR1P03372 595 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 NPPBP16860 134 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CHRM3P20309 590 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 NMBRP28336 390 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CCKARP32238 428 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PCYT1AP49585 367 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 HSD17B7P56937 341 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SKP1P63208 163 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 RNF4P78317 190 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CUL1Q13616 776 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 IQCB1Q15051 598 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ELAVL1Q15717 326 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 BBS9Q3SYG4 887 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PIGGQ5H8A4 983 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CCDC181Q5TID7 509 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PRAMEF20Q5VT98 475 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SLC22A10Q63ZE4 541 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 LCTLQ6UWM7 567 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 DNM1P46Q6ZS02 220 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 C22orf34Q6ZV56 151 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SYDE1Q6ZW31 735 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PLEKHM3Q6ZWE6 761 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 STRA8Q7Z7C7 330 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ADGRE4PQ86SQ3 457 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PM20D2Q8IYS1 436 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PRELID2Q8N945 189 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ANKRD53Q8N9V6 530 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SLC35B2Q8TB61 432 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PTPMT1Q8WUK0 201 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SLC44A1Q8WWI5 657 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ROBO4Q8WZ75 1007 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 TRIB1Q96RU8 372 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 SFXN3Q9BWM7 321 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 UGT2B28Q9BY64 529 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PCBD2Q9H0N5 130 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 RHBGQ9H310 441 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 UBQLN3Q9H347 655 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 KLHL31Q9H511 634 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 ETNK1Q9HBU6 452 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 PRTFDC1Q9NRG1 225 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 KLHL28Q9NXS3 571 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CNOT11Q9UKZ1 510 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 INTUQ9ULD6 942 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 BOKQ9UMX3 212 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 CAMK2AQ9UQM7 478 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 IKBKGQ9Y6K9 419 aa7.06□□□□□ -1.28
HERPUD1-206ENST00000563343 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 A8MV72 311 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 H3BMM5 538 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 PSMD12O00232 456 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 OR1F1O43749 312 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 AKR1B10O60218 316 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 TMCC2O75069 709 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 TRIM3O75382 744 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 ZNF189O75820 626 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 TNFSF13O75888 250 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 RCBTB2O95199 551 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 HPNP05981 417 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 THBS1P07996 1170 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 CTNNA1P35221 906 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 THBS2P35442 1172 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 GRK3P35626 688 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 AHRP35869 848 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 SCTRP47872 440 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 CDK9P50750 372 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 ATP5J2P56134 94 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 FAM27E3Q08E93 113 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 BMPR2Q13873 1038 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 RUNX2Q13950 521 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 CLEC12BQ2HXU8 276 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 MPEG1Q2M385 716 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 WIPI1Q5MNZ9 446 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 FNDC7Q5VTL7 733 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 AGTRAPQ6RW13 159 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 PLXDC2Q6UX71 529 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 MBOAT1Q6ZNC8 495 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 CENPUQ71F23 418 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 TMEM132CQ8N3T6 1108 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 LIX1Q8N485 282 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 ZNF441Q8N8Z8 693 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 MORN4Q8NDC4 146 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 ZPLD1Q8TCW7 415 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 OR4K3Q96R72 315 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 DNAJC7Q99615 494 aa7.05□□□□□ -1.28
HERPUD1-206ENST00000563343 PLA2G12AQ9BZM1 189 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms