RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 OR6Y1Q8NGX8 325 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 METTL6Q8TCB7 284 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 UTP15Q8TED0 518 aaKnown RBP14.75□□□□□ -0.05
USB1-208ENST00000563207 AGAP11Q8TF27 550 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 CCT6BQ92526 530 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 MOCOSQ96EN8 888 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 SMIM10Q96HG1 83 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 MS4A8Q9BY19 250 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 ROGDIQ9GZN7 287 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 REXO4Q9GZR2 422 aaKnown RBP14.75□□□□□ -0.05
USB1-208ENST00000563207 BRF2Q9HAW0 419 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 MID1IP1Q9NPA3 183 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 DMRT3Q9NQL9 472 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 ZNF446Q9NWS9 450 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 PTGFRNQ9P2B2 879 aa14.75□□□□□ -0.05
USB1-208ENST00000563207 CPAMD8Q8IZJ3 1885 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 IGHV3-20A0A0C4DH32 117 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 WIPF3A6NGB9 483 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 OR4F21O95013 312 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 PRR35P0CG20 571 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 HSD3B1P14060 373 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 TSPAN8P19075 237 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 IL10P22301 178 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 HSD3B2P26439 372 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 HMOX2P30519 316 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 CUL3Q13618 768 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 RCN2Q14257 317 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 ZNF169Q14929 603 aaPredicted RBP14.74□□□□□ -0.05
USB1-208ENST00000563207 TTMPQ5BVD1 217 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 TOR1AIP1Q5JTV8 583 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 ZNF787Q6DD87 383 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 TRIM40Q6P9F5 258 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 ZC3H7AQ8IWR0 971 aaKnown RBP14.74□□□□□ -0.05
USB1-208ENST00000563207 TRIM42Q8IWZ5 723 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 KIRREL3Q8IZU9 778 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 PPP1R14CQ8TAE6 165 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 BRIX1Q8TDN6 353 aaKnown RBP14.74□□□□□ -0.05
USB1-208ENST00000563207 TM9SF4Q92544 642 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 MS4A6EQ96DS6 147 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 FAR2Q96K12 515 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 KCNC2Q96PR1 638 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 SERPINI1Q99574 410 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 PRM3Q9NNZ6 103 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 NMRK1Q9NWW6 199 aa14.74□□□□□ -0.05
USB1-208ENST00000563207 SPTBN1Q01082 2364 aaKnown RBP14.74□□□□□ -0.05
USB1-208ENST00000563207 SCN2AQ99250 2005 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 IGHV1-45A0A0A0MS14 117 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 NSG1A0A0A6YYJ2 146 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 A0A1B0GTL3 188 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 SERTM1A2A2V5 107 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 MAGEB17A8MXT2 336 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 TMEM114B3SHH9 223 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 UBFD1O14562 309 aaKnown RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 DYNC1I1O14576 645 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 GALR3O60755 368 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 DNAJB6O75190 326 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 ULK1O75385 1050 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 WISP2O76076 250 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 TBX6O95947 436 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 TGFB1P01137 390 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 SERPINE1P05121 402 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 FGF4P08620 206 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 ZNF888P0CJ79 500 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 UROSP10746 265 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 ITGAMP11215 1152 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 NEFHP12036 1026 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 HNRNPH1P31943 449 aaKnown RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 MFAP5Q13361 173 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 PCOLCEQ15113 449 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 HSP90B2PQ58FF3 399 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 KHDRBS2Q5VWX1 349 aaKnown RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 ISLR2Q6UXK2 745 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 NDUFAF7Q7L592 441 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 CDYL2Q8N8U2 506 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 GBP7Q8N8V2 638 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 ANKRD42Q8N9B4 389 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 ZCCHC10Q8TBK6 192 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 RAB3IL1Q8TBN0 382 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 SELENOMQ8WWX9 145 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 MTERF1Q99551 399 aaKnown RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 PAIP2Q9BPZ3 127 aaKnown RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 TBCDQ9BTW9 1192 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 NPLQ9BXD5 320 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 TGIF2Q9GZN2 237 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 MKKSQ9NPJ1 570 aaPredicted RBP14.73□□□□□ -0.05
USB1-208ENST00000563207 AHSPQ9NZD4 102 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 NAALAD2Q9Y3Q0 740 aa14.73□□□□□ -0.05
USB1-208ENST00000563207 ERI3O43414 337 aaKnown RBP14.72□□□□□ -0.05
USB1-208ENST00000563207 CRCPO75575 148 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 SEMA3DO95025 777 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 B3GALT4O96024 378 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 HEXBP07686 556 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 IL1RNP18510 177 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 SOX11P35716 441 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 WDR4P57081 412 aaKnown RBP14.72□□□□□ -0.05
USB1-208ENST00000563207 CSTF3Q12996 717 aaKnown RBP14.72□□□□□ -0.05
USB1-208ENST00000563207 DDX39BQ13838 428 aaKnown RBP14.72□□□□□ -0.05
USB1-208ENST00000563207 CHI3L2Q15782 390 aa14.72□□□□□ -0.05
USB1-208ENST00000563207 ARL13AQ5H913 290 aaPredicted RBP14.72□□□□□ -0.05
USB1-208ENST00000563207 IRAK1BP1Q5VVH5 260 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms