RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PTRH1Q86Y79 214 aaKnown RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 SAMD14Q8IZD0 417 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 CLECL1Q8IZS7 167 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 D2HGDHQ8N465 521 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 AMER3Q8N944 861 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 TTC29Q8NA56 475 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ADAMTS18Q8TE60 1221 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 OR5P2Q8WZ92 322 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 THUMPD3Q9BV44 507 aaKnown RBP13.53□□□□□ -0.24
COMMD4-205ENST00000562310 SPATA9Q9BWV2 254 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 RAD21L1Q9H4I0 556 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ANKHQ9HCJ1 492 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 PACSIN3Q9UKS6 424 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 FBXW2Q9UKT8 454 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 ATG4BQ9Y4P1 393 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 SNX13Q9Y5W8 968 aa13.53□□□□□ -0.24
COMMD4-205ENST00000562310 A0A1W2PR48 441 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 FITM1A5D6W6 292 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 FAM220BPB1ANY3 271 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ACOT8O14734 319 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 PROM1O43490 865 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 SORBS2O94875 1100 aaKnown RBP13.52□□□□□ -0.25
COMMD4-205ENST00000562310 CPNE6O95741 557 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 C6orf47O95873 294 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 TCN1P20061 433 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-205ENST00000562310 CPN2P22792 545 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ABHD18Q0P651 414 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 CCNIQ14094 377 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 FAM53BQ14153 422 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 GRM7Q14831 915 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 SNCBQ16143 134 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 CCDC6Q16204 474 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 FXNQ16595 210 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 MPEG1Q2M385 716 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 GTDC1Q4AE62 458 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 OR52E8Q6IFG1 317 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 SLC48A1Q6P1K1 146 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ZNF621Q6ZSS3 439 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 DHFR2Q86XF0 187 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 MMP21Q8N119 569 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ARHGEF39Q8N4T4 335 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 KLHL6Q8WZ60 621 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 CIDECQ96AQ7 238 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-205ENST00000562310 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.25
COMMD4-205ENST00000562310 LRGUKQ96M69 825 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 MAPKAP1Q9BPZ7 522 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ZNF768Q9H5H4 540 aaKnown RBP13.52□□□□□ -0.25
COMMD4-205ENST00000562310 RNPEPL1Q9HAU8 725 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 FANCEQ9HB96 536 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 SLC35C2Q9NQQ7 365 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 TAS2R9Q9NYW1 312 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ACTR3BQ9P1U1 418 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 KLHL3Q9UH77 587 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 MAGEL2Q9UJ55 1249 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 DAPP1Q9UN19 280 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 R4GN57 208 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 RALGAPA1Q6GYQ0 2036 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 ZNF318Q5VUA4 2279 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 MUC6Q6W4X9 2439 aa13.52□□□□□ -0.25
COMMD4-205ENST00000562310 BLACEA4D250 179 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 CLIC1O00299 241 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 FLRT2O43155 660 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 GMNNO75496 209 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 PSMG1O95456 288 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 B3GALT4O96024 378 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 RPLP0P05388 317 aaKnown RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 GSNP06396 782 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 RETP07949 1114 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 MYF5P13349 255 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 IL1RNP18510 177 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 LIM2P55344 173 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 HBA1P69905 142 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 CFHR1Q03591 330 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 SELPLGQ14242 412 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 PERM1Q5SV97 790 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 YOD1Q5VVQ6 348 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 LCN8Q6JVE9 175 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 ZFP1Q6P2D0 407 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 USP53Q70EK8 1073 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 PROSER1Q86XN7 944 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 ENDOVQ8N8Q3 282 aaKnown RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 GOLM1Q8NBJ4 401 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 FAM156AQ8NDB6 213 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 OR2T12Q8NG77 320 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 OR4D9Q8NGE8 314 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 IFI44Q8TCB0 444 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 FAM120BQ96EK7 910 aaKnown RBP13.51□□□□□ -0.25
COMMD4-205ENST00000562310 BBS4Q96RK4 519 aa13.51□□□□□ -0.25
COMMD4-205ENST00000562310 NUDT22Q9BRQ3 303 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms