RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 IL16Q14005 1332 aa1.91□□□□□ -2.1
RTF1-207ENST00000561076 TNFSF12-TNFSF13A0A0A6YY99 330 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PPIAL4CA0A0B4J2A2 164 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 A0A1B0GVL5 298 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PN81 502 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 A0A1W2PRB8 838 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 hDV102S1A0JD36 115 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR2M5A3KFT3 312 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 RAB19A4D1S5 217 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 GOLGA6L9A6NEM1 432 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SMCO2A6NFE2 343 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 C12orf71A8MTZ7 269 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 VWC2LB2RUY7 222 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 C17orf105B2RV13 164 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TCP10L2B9ZVM9 353 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 FAM90A26D6RGX4 464 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 H3BTX0 84 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 WWP2O00308 870 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 DVL1O14640 695 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TRDMT1O14717 391 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 RRHO14718 337 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 POLR1CO15160 346 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 AKR7A2O43488 359 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR10H2O60403 315 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LPXNO60711 386 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LRP3O75074 770 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 UFL1O94874 794 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OAZ2O95190 189 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 STBD1O95210 358 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CALCAP01258 141 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 EPOP01588 193 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 OPN1LWP04000 364 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CT45A8P0DMV1 189 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CT45A9P0DMV2 189 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PPIAL4GP0DN37 164 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CTSAP10619 480 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PRKAR1AP10644 381 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 UMPSP11172 480 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ACADSP16219 412 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ZNF23P17027 643 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ZNF24P17028 368 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CKMT2P17540 419 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CYP2B6P20813 491 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CCNOP22674 350 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 UQCRC2P22695 453 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HOXA7P31268 230 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 HNRNPH1P31943 449 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 CASP14P31944 242 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 DCTDP32321 178 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CSTF2P33240 577 aaKnown RBP eCLIP1.9□□□□□ -2.11
RTF1-207ENST00000561076 OR1D2P34982 312 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CHRNA7P36544 502 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SPAM1P38567 509 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CDKN1AP38936 164 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 APOBEC1P41238 236 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 MAGEA8P43361 318 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CDKN1BP46527 198 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 PPP3CCP48454 512 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ACADVLP49748 655 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TPMTP51580 245 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 VAMP7P51809 220 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLC7A2P52569 658 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 IST1P53990 364 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 MLLT10P55197 1068 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HNRNPH2P55795 449 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 CLDN17P56750 224 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CLDN20P56880 219 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 RPS6P62753 249 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TNNC1P63316 161 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 GABPAQ06546 454 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 DMPKQ09013 629 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HYAL1Q12794 435 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 DRP2Q13474 957 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ITGA9Q13797 1035 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TOB2Q14106 344 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 KRT81Q14533 505 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HNF4GQ14541 408 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 GANABQ14697 944 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 HERC3Q15034 1050 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TAF13Q15543 124 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TGFBIQ15582 683 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CA9Q16790 459 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 KNOP1Q1ED39 458 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 DUOXA1Q1HG43 343 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 HNRNPA1L2Q32P51 320 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 CT45A2Q5DJT8 189 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 EPHA10Q5JZY3 1008 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CTSL3PQ5NE16 218 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 BEND6Q5SZJ8 279 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 NT5DC1Q5TFE4 455 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 C1QL3Q5VWW1 255 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 LRRC66Q68CR7 880 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SUMO4Q6EEV6 95 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 FAM109BQ6ICB4 259 aaPredicted RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 CAPRIN2Q6IMN6 1127 aaKnown RBP1.9□□□□□ -2.11
RTF1-207ENST00000561076 TCTN3Q6NUS6 607 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 ANKRD54Q6NXT1 300 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 CDC42EP5Q6NZY7 148 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 SLC27A4Q6P1M0 643 aa1.9□□□□□ -2.11
RTF1-207ENST00000561076 TMEM71Q6P5X7 295 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms