RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 OR2J2O76002 312 aa15.08■□□□□ 0
SNX1-213ENST00000561026 SNRPB2P08579 225 aaKnown RBP15.08■□□□□ 0
SNX1-213ENST00000561026 SLC35E2BP0CK96 405 aa15.08■□□□□ 0
SNX1-213ENST00000561026 MSH2P43246 934 aa15.08■□□□□ 0
SNX1-213ENST00000561026 GPR85P60893 370 aa15.08■□□□□ 0
SNX1-213ENST00000561026 CAV1Q03135 178 aa15.08■□□□□ 0
SNX1-213ENST00000561026 STX4Q12846 297 aa15.08■□□□□ 0
SNX1-213ENST00000561026 DLG1Q12959 904 aa15.08■□□□□ 0
SNX1-213ENST00000561026 HSDL2Q6YN16 418 aa15.08■□□□□ 0
SNX1-213ENST00000561026 C3P1Q6ZMU1 363 aa15.08■□□□□ 0
SNX1-213ENST00000561026 ZNF793Q6ZN11 406 aa15.08■□□□□ 0
SNX1-213ENST00000561026 NCCRP1Q6ZVX7 275 aaPredicted RBP15.08■□□□□ 0
SNX1-213ENST00000561026 RAPH1Q70E73 1250 aa15.08■□□□□ 0
SNX1-213ENST00000561026 CMC1Q7Z7K0 106 aa15.08■□□□□ 0
SNX1-213ENST00000561026 EID3Q8N140 333 aa15.08■□□□□ 0
SNX1-213ENST00000561026 PPM1NQ8N819 430 aa15.08■□□□□ 0
SNX1-213ENST00000561026 ACOT4Q8N9L9 421 aa15.08■□□□□ 0
SNX1-213ENST00000561026 MORN4Q8NDC4 146 aa15.08■□□□□ 0
SNX1-213ENST00000561026 ZNF473Q8WTR7 871 aaKnown RBP15.08■□□□□ 0
SNX1-213ENST00000561026 EXT2Q93063 718 aa15.08■□□□□ 0
SNX1-213ENST00000561026 MTFMTQ96DP5 389 aaKnown RBP15.08■□□□□ 0
SNX1-213ENST00000561026 DMRTA2Q96SC8 542 aa15.08■□□□□ 0
SNX1-213ENST00000561026 MS4A8Q9BY19 250 aa15.08■□□□□ 0
SNX1-213ENST00000561026 LIN28AQ9H9Z2 209 aaKnown RBP15.08■□□□□ 0
SNX1-213ENST00000561026 NMRAL1Q9HBL8 299 aa15.08■□□□□ 0
SNX1-213ENST00000561026 TIMMDC1Q9NPL8 285 aa15.08■□□□□ 0
SNX1-213ENST00000561026 NUDT4Q9NZJ9 180 aa15.08■□□□□ 0
SNX1-213ENST00000561026 ERVK-11Q9UQG0 969 aa15.08■□□□□ 0
SNX1-213ENST00000561026 OTOGQ6ZRI0 2925 aa15.07■□□□□ 0
SNX1-213ENST00000561026 TACC2O95359 2948 aa15.07■□□□□ 0
SNX1-213ENST00000561026 MYOCOSA0A1B0GUC4 107 aa15.07■□□□□ 0
SNX1-213ENST00000561026 A8MVJ9 347 aa15.07■□□□□ 0
SNX1-213ENST00000561026 TUBB4AP04350 444 aa15.07■□□□□ 0
SNX1-213ENST00000561026 ATP5A1P25705 553 aaKnown RBP15.07■□□□□ 0
SNX1-213ENST00000561026 CRABP2P29373 138 aa15.07■□□□□ 0
SNX1-213ENST00000561026 PTGS2P35354 604 aa15.07■□□□□ 0
SNX1-213ENST00000561026 MAGEA4P43358 317 aa15.07■□□□□ 0
SNX1-213ENST00000561026 PCDH1Q08174 1060 aa15.07■□□□□ 0
SNX1-213ENST00000561026 SLMAPQ14BN4 828 aa15.07■□□□□ 0
SNX1-213ENST00000561026 TMEM35AQ53FP2 167 aa15.07■□□□□ 0
SNX1-213ENST00000561026 CMPK2Q5EBM0 449 aa15.07■□□□□ 0
SNX1-213ENST00000561026 GDF7Q7Z4P5 450 aa15.07■□□□□ 0
SNX1-213ENST00000561026 GPALPP1Q8IXQ4 340 aa15.07■□□□□ 0
SNX1-213ENST00000561026 LAS2Q8IYD9 372 aa15.07■□□□□ 0
SNX1-213ENST00000561026 PSD4Q8NDX1 1056 aa15.07■□□□□ 0
SNX1-213ENST00000561026 OR14A16Q8NHC5 309 aa15.07■□□□□ 0
SNX1-213ENST00000561026 FAM57AQ8TBR7 257 aa15.07■□□□□ 0
SNX1-213ENST00000561026 FBXO25Q8TCJ0 367 aa15.07■□□□□ 0
SNX1-213ENST00000561026 FBF1Q8TES7 1133 aa15.07■□□□□ 0
SNX1-213ENST00000561026 UBE2E3Q969T4 207 aa15.07■□□□□ 0
SNX1-213ENST00000561026 ATOH8Q96SQ7 321 aa15.07■□□□□ 0
SNX1-213ENST00000561026 MAPKAP1Q9BPZ7 522 aa15.07■□□□□ 0
SNX1-213ENST00000561026 DEPPQ9NTK1 212 aa15.07■□□□□ 0
SNX1-213ENST00000561026 HPF1Q9NWY4 346 aa15.07■□□□□ 0
SNX1-213ENST00000561026 PDZD2O15018 2839 aa15.06■□□□□ 0
SNX1-213ENST00000561026 C19orf84I3L1E1 186 aa15.06■□□□□ 0
SNX1-213ENST00000561026 WWP2O00308 870 aa15.06■□□□□ 0
SNX1-213ENST00000561026 RTCAO00442 366 aaKnown RBP15.06■□□□□ 0
SNX1-213ENST00000561026 KERAO60938 352 aa15.06■□□□□ 0
SNX1-213ENST00000561026 LDB3O75112 727 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OR6B1O95007 311 aa15.06■□□□□ 0
SNX1-213ENST00000561026 SCELO95171 688 aa15.06■□□□□ 0
SNX1-213ENST00000561026 TGFB1P01137 390 aa15.06■□□□□ 0
SNX1-213ENST00000561026 LTA4HP09960 611 aaKnown RBP15.06■□□□□ 0
SNX1-213ENST00000561026 TNNI3P19429 210 aa15.06■□□□□ 0
SNX1-213ENST00000561026 HIST1H1TP22492 207 aaPredicted RBP15.06■□□□□ 0
SNX1-213ENST00000561026 STX2P32856 288 aa15.06■□□□□ 0
SNX1-213ENST00000561026 SERTAD2Q14140 314 aa15.06■□□□□ 0
SNX1-213ENST00000561026 TRADDQ15628 312 aa15.06■□□□□ 0
SNX1-213ENST00000561026 AP5B1Q2VPB7 878 aa15.06■□□□□ 0
SNX1-213ENST00000561026 MED27Q6P2C8 311 aa15.06■□□□□ 0
SNX1-213ENST00000561026 ZDHHC24Q6UX98 284 aa15.06■□□□□ 0
SNX1-213ENST00000561026 CHSY3Q70JA7 882 aa15.06■□□□□ 0
SNX1-213ENST00000561026 TBC1D1Q86TI0 1168 aaPredicted RBP15.06■□□□□ 0
SNX1-213ENST00000561026 CCDC25Q86WR0 208 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OR7G3Q8NG95 312 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OR52N2Q8NGI0 321 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OR8K3Q8NH51 312 aa15.06■□□□□ 0
SNX1-213ENST00000561026 UBTD2Q8WUN7 234 aa15.06■□□□□ 0
SNX1-213ENST00000561026 ASB15Q8WXK1 588 aa15.06■□□□□ 0
SNX1-213ENST00000561026 RASL10BQ96S79 203 aa15.06■□□□□ 0
SNX1-213ENST00000561026 TRIM8Q9BZR9 551 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OR8D2Q9GZM6 311 aa15.06■□□□□ 0
SNX1-213ENST00000561026 RAB17Q9H0T7 212 aa15.06■□□□□ 0
SNX1-213ENST00000561026 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
SNX1-213ENST00000561026 IGSF5Q9NSI5 407 aa15.06■□□□□ 0
SNX1-213ENST00000561026 OPTCQ9UBM4 332 aa15.06■□□□□ 0
SNX1-213ENST00000561026 PPT2Q9UMR5 302 aa15.06■□□□□ 0
SNX1-213ENST00000561026 SPACA6W5XKT8 324 aa15.06■□□□□ 0
SNX1-213ENST00000561026 C17orf105B2RV13 164 aa15.05■□□□□ -0
SNX1-213ENST00000561026 SUPT3HB4E1H0 165 aa15.05■□□□□ -0
SNX1-213ENST00000561026 K7EPI3 171 aa15.05■□□□□ -0
SNX1-213ENST00000561026 UBXN8O00124 270 aa15.05■□□□□ -0
SNX1-213ENST00000561026 CDC40O60508 579 aaKnown RBP eCLIP15.05■□□□□ -02e-6■■■■■ 31.7
SNX1-213ENST00000561026 SUPT3HO75486 399 aa15.05■□□□□ -0
SNX1-213ENST00000561026 PCNAP12004 261 aa15.05■□□□□ -0
SNX1-213ENST00000561026 ELAVL4P26378 380 aaKnown RBP15.05■□□□□ -0
SNX1-213ENST00000561026 SERPINB1P30740 379 aa15.05■□□□□ -0
SNX1-213ENST00000561026 CASQ1P31415 396 aa15.05■□□□□ -0
SNX1-213ENST00000561026 SOX3P41225 446 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms